Xenopus laevis (African clawed frog): 108708917
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Entry
108708917 CDS
T01010
Symbol
srsf1.S
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108708917 (srsf1.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108708917 (srsf1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108708917 (srsf1.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
108708917 (srsf1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
CoV_nucleocap
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108708917
NCBI-ProteinID:
XP_041440663
Xenbase:
XB-GENE-17339498
UniProt:
A0A8J1MGK2
LinkDB
All DBs
Position
2S:65904899..65919978
Genome browser
AA seq
376 aa
AA seq
DB search
MPVLHADRLGRIERALDKMGGHGYTRMMPGGREHGSLSAARIHADRCICQKPVSYTVKED
CHGWDERTLGIDEGGRWCRGEKSLLSRRLRNERIYLLLAPSPFKSIKLDTSGGGVIRGPA
GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV
YGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRY
GPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAV
RKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSR
GSPRYSPRHSRSRSRT
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgctacacgctgatcgcctaggacggatcgagagggcgcttgataagatggga
ggacatggatatacccgaatgatgccaggtgggcgtgagcatgggagcctatcggcggcc
cggatacacgcagatcggtgcatctgtcagaaaccggtgtcctatactgtcaaagaggat
tgtcatggatgggatgagaggacgcttggtattgatgaaggcggtcgttggtgcagagga
gagaaatcattactttcgagaagacttaggaacgaaaggatctaccttctcttggctccg
tctccctttaaatccatcaagctggatacgtcagggggcggcgtgatcaggggaccggcg
ggaaacaacgactgccgcatttatgtgggcaatctcccgcctgatatccgtaccaaggac
atcgaggacgttttctacaagtatggagctatccgcgatatagatctaaagaaccgcaga
ggggggccaccattcgcctttgtggaattcgaggacccaagggatgcagaagatgctgtc
tatggtagagatggctatgattatgatggctatcgcttgcgtgttgagtttccaagaagt
ggcagaggcgctggaggcagaggcggtggtggtggtggcggaggaggtggtggtggtggt
ggtggcggcggaggaggtggtggtggtggaggcggtgggggagctccacgagggagatac
ggaccaccatcaagacgttcagaatacagagtggttgtgtcagggttgcctccaagtggc
agctggcaggatttaaaggatcacatgcgtgaagcaggtgatgtatgttatgccgatgtg
ttccgagatggtactggagttgtggagtttgtgaggaaggaagatatgacttatgcagta
cggaagctggataacactaaatttaggtctcatgagggagagactgcctacattcgtgta
aaggtagatggtccaagaagccccagctatggaagatcgcggtcacgcagccgcagtcgt
agcaggagccgtagtagaagcaacagccgcagccgaagttactctccaagacgaagccgt
ggttctccacgttactctccccgtcacagcagatctcgctctcgtacataa
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