Xenopus laevis (African clawed frog): 108709227
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Entry
108709227 CDS
T01010
Symbol
paxbp1.S
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108709227 (paxbp1.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108709227 (paxbp1.S)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
NTR2
Motif
Other DBs
NCBI-GeneID:
108709227
NCBI-ProteinID:
XP_018104372
Xenbase:
XB-GENE-17342468
UniProt:
A0A974HVA7
A0A1L8H5B1
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Position
2S:complement(19611168..19637490)
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AA seq
883 aa
AA seq
DB search
MFRKARRVNVRKRNDSEDEERETGSSFTAPVEHSEPMFSVALHPVSIPLLGPDTGPPRCK
KEGNSVVSKGGSLLSFQDDDDGEEIFTVKKSNYSKKIAKLLKKEYQEDLEKTKPKSVGNS
SVDGDGFMNRSQLPKDGVQQDVIVGSELGEEEMEVESEKEEEKPKAGSFANAVSALNVLR
PGEIPDAAFIHAARKKRQMARELGDAPSVDGEVGGKSRLVREDENDASDDEDDDKRRIVF
SVREKSQRQKIAEEIGIEGSDDEALATGDQDEELSRWEQEQIRKGISIPQVQAPQPPETN
MFYPTTYQGIPYGTTYGVPYIYAAYGSTETKSQKPDNSVSFKTPSNEMTPVTIDLVKKQL
KDRLDAMKEVHKANLEQYEKHVQSREDSTNSISRLEGCSGGNAERYQFLQEMRGYVQDLL
ECFREKVPLINELESAMHQLYKQQAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDPFG
RDRALFQEHAKQRRIAEREARRTRRRQAREVTGKMAEHLEGLSSDDEETSTDITNFNMEK
DRILKEANKVFEDTLENFHSIDCIKAQFETWRSTYYSTYKDAYIGLCLPKLLNPLVRLQL
LTWNPLEANCRNFESLRWFECLLFYGCEEKEYDKEDADIVLLPSLVEKVILPRLTGIAEN
VWDPFSTTQTIRLAAVVQKLMNGYPTVLNSENKYTEAFLKALLMRMRRTLDDDVFMPLYP
KNVIENKNSAPCIFFHRQFWSSVKLLGNFLKWHGVLSNKALQELSVDGLLNRYILMAFQN
TENGEESIKKAQSVITCFPRQWFSNLKGGKTIPQLENFVRYLTHLAGTIYRSNVGCSDIE
RRNAREQIKQVVKLLASIRALESAMSVANDYNVKDMKAPTEGK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaggctcggcgagtgaatgtgcgaaagcgcaatgattcggaggacgaggag
cgagagaccggctcttctttcacggcgcccgtcgaacattccgagccgatgttttcggta
gcgctgcacccggtttctatcccgctgctcgggccggacactgggcctcctcggtgcaag
aaggaggggaactctgtagtgagtaaggggggcagcctcctcagcttccaggatgatgat
gacggcgaggaaatctttacagtgaaaaaatccaattacagcaaaaaaatagcgaagctg
ctgaaaaaggagtatcaagaagatctggagaagaccaagccgaagtcagttggcaacagt
tctgtagacggtgatggatttatgaacagatcccagcttccgaaggatggagttcaacaa
gatgtcattgttggcagcgaattaggggaggaggaaatggaagttgaaagtgaaaaagaa
gaggagaaacccaaagctggctcgtttgcaaatgcagtgtctgctctaaatgtcttacgc
ccaggtgagattccagacgccgcattcatccacgcagcgcgaaaaaagagacagatggct
cgggaacttggagacgccccgtctgtagatggagaggtgggtggtaaaagtcgattggtg
cgtgaagatgaaaacgatgcaagcgatgatgaagacgacgataagaggcgaatagtcttt
tccgttcgagagaaatctcaaagacagaaaatagcagaggaaattggaattgaaggaagt
gatgatgaggctttagcaacaggagaccaagatgaagaactcagccgatgggagcaggaa
cagattcggaaaggaattagtattccacaggtacaagcaccacagcctccagagacaaat
atgttctacccaactacttaccaaggaattccttatggcacgacatatggcgttccctac
atttatgctgcttacggatccactgagacaaaatctcagaaaccagataattctgtctct
ttcaaaactcccagtaatgagatgactcctgttactattgatttggtaaagaaacagctt
aaagacaggttggatgcaatgaaagaagtgcacaaagcaaaccttgaacagtatgagaaa
catgtgcaaagcagagaggactccactaattccataagtcggttggaagggtgttcaggg
ggtaatgccgaacgataccagtttttgcaagaaatgcgagggtatgtccaagacttgctt
gagtgtttccgtgaaaaggtaccactgataaatgagcttgaatctgcaatgcaccagctg
tacaaacagcaagccgcccgccttgtccaaagacgacaagatgatattaaggatgaatct
tcggagttttcgagccattcaagtaaagctgtaatggcaccaaatctggacccatttggg
cgggaccgggcacttttccaggaacatgcaaaacagaggaggatcgcagaaagagaagcc
agaagaacgcgccgccgacaagccagagaagtaactggcaagatggcagagcaccttgaa
ggtctgtccagtgatgatgaagaaacgtcaactgatattacaaacttcaacatggagaaa
gatcgaattttaaaggaggcaaacaaggtgtttgaggacacactggaaaatttccattcc
atagactgcatcaaagctcagtttgaaacatggcgctcaacctactatagcacatacaaa
gatgcatacatcggcctttgtctgccaaagttgcttaatcccctagtacgattgcaactt
ttaacttggaatccactggaggcaaactgtcgcaactttgaaagtttgaggtggtttgag
tgtctgcttttttatggctgtgaagaaaaggagtacgacaaggaggatgcagacattgtc
ctcttgccatcactggttgaaaaggttattctccccagacttacaggtattgctgagaat
gtatgggaccccttctctacgacacagaccatcaggcttgcagcggttgttcagaagctc
atgaatggatatcctactgttttaaactctgaaaataaatatacagaggcatttctcaag
gcactgctgatgagaatgagaaggacgttagacgatgatgtcttcatgccattatatcct
aaaaatgtcattgaaaataagaactctgctccgtgcatatttttccaccgccagttttgg
tcgtctgtaaagttactagggaattttctaaagtggcatggagtgctctccaacaaagca
ttgcaggagttgtcagtagatgggcttctaaaccgatacatcctgatggcatttcagaac
actgagaatggggaagagagcattaaaaaagcccaaagtgttatcacatgttttccaagg
caatggttctccaatcttaaaggaggtaaaacgattccacagctagaaaactttgttcga
tatctcacccatttggctggtacaatatacagaagcaatgttggctgctcagacatagag
agaagaaacgcaagagagcaaataaaacaggttgtaaaactactagcaagtatccgggcc
ctggaaagtgccatgtctgttgccaacgactacaatgtgaaagacatgaaagcaccaaca
gaaggcaaataa
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