Xenopus laevis (African clawed frog): 108709835
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Entry
108709835 CDS
T01010
Symbol
rab5b.S
Name
(RefSeq) ras-related protein Rab-5B isoform X1
KO
K07888
Ras-related protein Rab-5B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04144
Endocytosis
xla04145
Phagosome
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108709835 (rab5b.S)
04145 Phagosome
108709835 (rab5b.S)
04137 Mitophagy - animal
108709835 (rab5b.S)
04148 Efferocytosis
108709835 (rab5b.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108709835 (rab5b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108709835 (rab5b.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108709835 (rab5b.S)
04031 GTP-binding proteins [BR:
xla04031
]
108709835 (rab5b.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
108709835 (rab5b.S)
Endosome - Lysosome transport
108709835 (rab5b.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108709835 (rab5b.S)
Exosomal proteins of other body fluids (saliva and urine)
108709835 (rab5b.S)
Exosomal proteins of colorectal cancer cells
108709835 (rab5b.S)
Exosomal proteins of melanoma cells
108709835 (rab5b.S)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108709835 (rab5b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
108709835
NCBI-ProteinID:
XP_018105512
Xenbase:
XB-GENE-17330601
UniProt:
A0A1L8H9N8
A0A974HWD4
LinkDB
All DBs
Position
2S:complement(129408939..129444989)
Genome browser
AA seq
215 aa
AA seq
DB search
MAGRGPARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALSGNKADLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKTEPQNTSGAPGRSRGVDLHEQTQQNKSQCCSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccgggagaggacctgcaaggccaaatggtcagtctcaagccagtaaaatatgccaa
tttaaattggtacttctaggtgaatcagcagtaggaaagtcgagccttgtattgcgtttc
gtgaaggggcagtttcatgagtttcaggaaagtaccattggtgcggcatttctcacacag
tctgtctgcctggatgacacaactgtaaaatttgaaatctgggatacagcaggacaagag
agataccacagtttggcaccgatgtattaccggggagcacaggctgccattgtggtgtat
gatatcacaaaccaggaaacatttgccagagccaagacttgggtgaaagagctccagagg
caagccagtcctaacattgtgatagctttgtcagggaacaaggctgacctcactagtaaa
cgaatggtggagtatgaagaagctcaagcatatgcagatgacaacagcctgttgtttatg
gaaacctctgccaagaccgcaatgaatgtcaatgacctgtttcttgcaatagctaagaag
ctgccaaaaacggaacctcagaacactagtggtgcacctggtaggagcaggggtgtggat
cttcatgagcagacccagcagaacaagagccagtgctgcagcaactga
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integrated database retrieval system
