Xenopus laevis (African clawed frog): 108712742
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Entry
108712742 CDS
T01010
Symbol
pax8.S
Name
(RefSeq) paired box protein Pax-8 isoform X1
KO
K09293
paired box protein 8
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108712742 (pax8.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108712742 (pax8.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
108712742
NCBI-ProteinID:
XP_018110617
Xenbase:
XB-GENE-17334490
UniProt:
A0A974D952
A0A1L8GS54
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Position
3S:complement(27492955..27513682)
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AA seq
467 aa
AA seq
DB search
MPNSSIRSELITERGCSGPASNLNIENGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVR
PCDISRQLRVSHGCVSKILGSRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTM
FAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQLFNLPMESCVKSLSPGQTLIPSSA
VTPPESPHSDSLGSPYSISGLLGITQPSADGKRKLDDSDQESCRLSIDSQGSVGISRKQF
RTEAYGHHPLDALECHFQRQHFPESYSSSTHSKTEQALYTLPLLNNAMEDGKSSLTSTNT
TIGRDLTTHQGYSSLSERSAFSIKHEASDSSSASSTPSSLCSPTFLDLQPISTGCSAPSF
SVFSHPASVYGQFTSHVASGRDVVGSTLPGYPPHIPSGQGNYASSAIAGMVAAGGDYSGN
AYSHGAYAAYGDSWRFPSSSLLGSPYYYSSATRTAPPPTTAGAYDLL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacagcagcatcagatcagagctcatcacagagaggggctgctcaggacctgcc
agcaatctcaatatagaaaacggaggtttgaatcagctaggtggagcgtttgtgaatggg
cgtcccctgccagaggtggtgaggcagcggattgttgacctggcgcaccagggggttcgt
ccctgtgacatctcacgacagctcagagtcagtcatggctgtgtcagcaaaattttgggc
agtaggtactatgagacaggcagtattcggccaggcgtcatcggaggttcaaagcctaag
gttgctacccccaaagtggtggagaaaattggagattacaaacgccagaacccaacaatg
tttgcctgggaaatcagggaccggctgctggcagagggggtgtgcgacaacgacacggtt
cccagtgtcagctctatcaacaggatcatacgcaccaaagtacagcaactttttaacctg
cctatggagagctgtgtaaaatcactgagcccaggacaaactctaatccctagttcagca
gtgacgccccctgagtctcctcattcagactctctcggatccccgtattccatcagtggt
ttgttggggatcacgcagcccagtgcagatggaaagcgcaaacttgatgacagtgaccag
gagagctgcaggctcagcattgactcccaaggcagtgtgggcatcagcaggaaacagttc
cgtacggaggcatatgggcaccaccctttggatgccctggagtgtcactttcagagacaa
catttcccggagtcctactcctcttccactcacagcaaaacagaacaggctctatatacc
ctacccctgctcaataatgcaatggaggatgggaaatcatcactgacttccacaaacaca
acaattggcagagacctcacaacccaccagggatactcttctctatctgaacgctcagcc
ttctccattaaacatgaggcttctgacagctccagcgctagctccaccccttcatcttta
tgtagccccaccttcctggatctgcagccaatcagcacaggatgctcagcaccatccttc
agtgttttttcacaccctgcatctgtgtatggccagttcacaagccatgtggcctcaggt
cgtgatgtagttggatcgacattgccaggatacccacctcacatacccagtgggcaagga
aattatgcctcctctgcaattgctggaatggtagctgcaggaggtgattactctggaaat
gcctacagccatggggcttatgcagcgtacggagacagttggcgcttccccagctccagc
cttttaggctctccctattactacagctctgccacaaggactgcacctccccccacaacg
gcaggagcttatgaccttctgtag
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