Xenopus laevis (African clawed frog): 108714976
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Entry
108714976 CDS
T01010
Symbol
cngb1.S
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108714976 (cngb1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108714976 (cngb1.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108714976 (cngb1.S)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108714976
NCBI-ProteinID:
XP_041417190
Xenbase:
XB-GENE-17336074
UniProt:
A0A8J1KIL6
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Position
4S:complement(55258238..55327574)
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AA seq
1247 aa
AA seq
DB search
MFSWIEKVIPQPPDTPRKTSAEAQEGCHAKSDEKETCVMNEADNPPAVVKTQEEEQESDK
GAAGVLTWLSQGLGRVIPQPVESPTLTRPNNESTVPAVVEQKEVKLSETVEKQTEIKLTD
HTDSVPTGVLSWLSQGLEKVVPQPSLAPKSGISGGTEGGAVIVEPAPLREEKNIVVEEVK
VSPPTPVHTPAPAPVPESQPIIIEVQPVISSEPEVSSTDKGRSGAGVMGWLMQGLGKVVP
QPEHVAPPATKVEEEKPEEEEKPAQLPQKDTKRSSDTGVFRWITQGIEKVIPQPSVIAKQ
DSQTITLCPVEEICILPPSPDDNLLVEDLEDVDSHADETGQCTAPALMDTEEEVKQELES
KGLVTEAEVPHIETGGSQEVMQYEDLTCDSALTNLPKSEDQKEPKGVEKEAVESENECLS
WITEEDEDEAELQVSYYDSESEEQIKVSHKVILADPPEYLDTSVLVATQAGVEECNYLKQ
VSEQTLSPLSLPEPDGRFFTHPAVSIEDVDSGSITDALEHEDLVRPPVSPCRHRTLIVPV
TSLPAKSTKRTQSQEDNMEGISDAASEDEEVMERSASAISHSSAKITERLQELVRMFKDR
TERVKEKLIDPELSSEDESPSVSPSKKSAPSPPPPPPPPPPAEEKKDDVEVPAEEEHYCE
MLCCKFKTRPWRDRLLKLKFPSSIDPLTNVMYVLWLFFVVLAWNWNCWLIPVRWAFPYQT
SSNIHYWLLMDYLCDLIYLLDITLFQARLQFVRGGDIITDKKQMREHYFKTDRFKMDLIS
LLPLDVLYLKFGVKSLLRLPRILKYMAFFEFNSRLEAILSKAYIYRVIRTTAYLLYCLHM
NACLYYWASDYEGIKSTPWVFDGEGNSYIRCYYWAVKTLITIGGLPDPDTLFELWFQLLN
YFMGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNCYKIPRPVQNRVKMWYEYT
WQSQGMLDESELMVQLPDKMRLDLAIDVNYSIVSKVVLFQGCDRQMIYDMLKRLRSVVYL
PGDYVCKKGEIGREMYIIKAGEVHVLGGPDGKTVLVALKAGSVFGEISLLAVGGGNRRTA
NVVAHGFTNLFILDKKDLNEILLHYPESQKLLRQKAKKMLKNSNKPKGEAGQGKGLQHII
PERPETPKLLKAAVATTEKMGFKGFSKLRRRMKVMQTIEPTTANPVPPGTPMHRRTPVPQ
IKPVDDDSTEIVSESADNTVFIRVSPSPRGDEQILSVEVIAPEDEAK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctggattgagaaagtcatcccgcagcctcctgacacaccaagaaaaacatct
gctgaggcccaggagggctgccatgccaagagtgatgagaaggagacatgtgtgatgaat
gaggctgacaaccctccagcagtagtaaagactcaagaggaggaacaagagtctgacaaa
ggggctgcaggagtactaacctggctgtcccagggtttaggaagagtaatccctcaacct
gttgagagcccaacacttacacgtccaaataatgagagtacagtgccagcagtagtggag
cagaaagaggtaaaattaagtgagacagtggaaaagcagactgagatcaaacttacagac
cacacagatagtgttcccaccggggtcctttcctggttgtctcagggcttggaaaaagtg
gttcctcaaccctcattggcaccaaagtcagggatcagtggaggaacggagggtggtgca
gtaattgtagaaccggcaccactacgggaagaaaaaaacatagttgtagaagaggtaaag
gtttctcctccaacaccagtacatactcctgccccagctccagtgccagagtcccaacca
atcattattgaggtgcagccagtaatcagctcagaaccagaggtctcatcaacagacaaa
ggcaggtcaggagctggagtcatggggtggctcatgcagggcctggggaaagtagtacca
cagccagagcatgttgctccaccagctactaaagtagaggaagagaaacccgaggaagaa
gaaaagcctgcacaattgccccagaaagacaccaaaagaagcagtgacacaggggttttc
agatggattacacaaggtatagagaaggttattccccaaccatctgtcatagcaaagcag
gattctcagaccatcaccctatgcccagtggaggaaatttgtatcctgcctcccagccct
gatgataatctgcttgtggaagacttagaagatgtggatagccatgcagatgaaacagga
cagtgcacagctccagcactaatggatactgaagaggaagtcaagcaagaattagaaagc
aaaggtcttgtcacagaggcggaagtgccgcacatagaaacaggtggttcccaggaagtg
atgcaatatgaggacctgacatgtgactctgccctaaccaacctcccaaaatctgaagac
caaaaagagccaaaaggggtagagaaggaagcagtggaatctgaaaatgagtgcctctcc
tggatcacagaagaagatgaagatgaggccgagctgcaagtatcatattatgacagtgaa
agtgaagaacaaatcaaggtgtcacacaaggtgattttggcagatccacccgaatacctg
gacacttcagttcttgtagctactcaagctggagtggaggagtgcaattatttaaagcag
gtttcggagcagactttaagccccttgtcattgccagaacctgatggaagattctttaca
catccagcagtcagtattgaagatgtggactctggtagtataacagatgctctggaacat
gaagaccttgtgaggcctccagtgtcaccatgtagacataggactcttatagtgcctgtc
acatctttgcctgctaaaagtacaaagaggacacagtcccaagaagacaatatggagggt
atatctgatgctgcatcagaggatgaagaagttatggagagatctgcttcagcaatcagt
cacagcagcgcaaaaataacagagcgcctgcaggaactggttcgcatgttcaaggaccgg
acagaacgcgttaaggagaaactgattgaccctgaactgtcctccgaagatgaaagtcca
tctgtctctccctccaaaaaaagtgcaccgtcccctcctcctcctcctcctccaccccct
ccagccgaagagaagaaagatgatgttgaagtcccagcagaagaggagcattattgtgaa
atgctatgttgcaagtttaaaaccaggccctggcgtgaccgtctcctgaaactcaaattt
ccatccagcatcgaccctctgactaatgttatgtatgtgttgtggctattttttgtcgta
ttggcatggaattggaactgctggctaatccctgtacgctgggcttttccataccaaaca
tccagcaacatccattactggctgctcatggattacctgtgcgaccttatctacctgcta
gatattaccctgttccaggccaggctacagtttgtccgaggaggagacatcattacagat
aagaaacaaatgcgagagcattacttcaagactgatcggtttaagatggatctcatttct
cttctcccattggatgttctttatttgaaatttggcgtcaagtctttattgagattgcca
cgtattttaaagtacatggctttctttgaatttaacagtcgactggaagccatcctgagc
aaggcttacatctacagggtgattcgaaccactgcttaccttctctactgcctgcatatg
aatgcctgtctatactactgggcctctgactatgagggtataaaatccaccccatgggtt
tttgatggtgaagggaacagttatatccgttgttactactgggctgtaaagactttgata
accattggaggacttcctgacccagacacactttttgaactctggtttcagctgctaaat
tacttcatgggtgtgtttgccttttccgtcatgattggtcagatgagagatgtggttggg
gcagcgacagcaggacagacatattaccgcagctgtatggacagtaccatcaaatacatg
aactgctacaagatccctcgacctgtacaaaatcgtgtcaagatgtggtatgaatacaca
tggcaatcccagggcatgcttgatgaatcagaactcatggttcagcttcctgataagatg
agattggacctcgctatagatgtcaattacagtattgtgagcaaagtagttctatttcag
gggtgtgacaggcagatgatttatgatatgctgaagagactgcgctctgtggtttactta
cccggagattatgtctgcaaaaagggagaaattggtcgggaaatgtatattatcaaagct
ggagaagtccatgtactaggaggccctgatggcaaaactgtactagtcgctttaaaagct
gggtctgtttttggagaaatcagtcttctggctgtgggaggtggaaacagacggacagca
aatgttgttgctcatggatttaccaaccttttcattctggataaaaaagacctgaatgaa
attttacttcattatcctgaatcccagaagctccttcgccaaaaagcaaaaaaaatgttg
aagaatagcaacaaaccaaaaggtgaggctggtcagggaaaaggattgcagcatatcatc
cctgaaaggccagagaccccaaaactcctgaaggctgcagttgccaccactgaaaaaatg
ggtttcaagggattttccaaactaaggcgcaggatgaaagtgatgcaaacgatagagccc
accacagccaatcctgttccacccgggacacccatgcacaggcgaaccccagttcctcag
atcaagcctgttgatgacgactctactgaaattgtatctgagtctgcagacaacacagtg
tttattcgtgtcagcccatcacctcggggtgatgaacaaatcctttctgtggaagtgata
gccccagaggatgaagctaaataa
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