Xenopus laevis (African clawed frog): 108715538
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Entry
108715538 CDS
T01010
Symbol
lhx5.L
Name
(RefSeq) LIM/homeobox protein Lhx5-like
KO
K18493
LIM homeobox protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108715538 (lhx5.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108715538 (lhx5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
108715538
NCBI-ProteinID:
XP_018116286
Xenbase:
XB-GENE-17330956
UniProt:
A0A974E2X5
A0A1L8HZV4
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Position
1L:158120917..158143566
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AA seq
402 aa
AA seq
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MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRDSKLYCKTDFFRRF
GTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYT
SVSSLKESSLNSVSSCTDRSLSPDLQDPIKDESKETDHSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESDILNSGPYSYYGDYQGDYYGSGNYDFFPHGPP
SSQTQSPADSSYLQNSGPGSTPLGPLESQLSGHHPSENQRYADMISHPDTPSPEPGMTGS
LHSISGEVFSGGPSPPFSMSNNSGFSGPLPHQNPDINEATVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccattgcgctgggtgtgagaggcccatcttggaccgatttctccttaatgtc
ctggacagagcctggcatgtcaaatgtgtgcagtgctgtgagtgcaagtgcaatctgacc
gaaaagtgcttctccagggacagtaaactctactgcaaaactgacttcttcaggagattt
ggtacaaaatgtgcaggatgctccctggggatctctccaagtgacttggtcaggaaagcg
aggaataaagtgtttcacctgaactgtttcacctgcatggtgtgcaataagcagctctca
acaggcgaggaactctacatcatagatgaaaacaaatttgtctgcaaagaggattatacc
agtgtcagcagtctgaaggaaagcagcctcaactcagtgtcttcttgcacagacagaagt
ttgtctccagacctccaagaccccataaaggatgagagcaaagagacagaccactccaca
tcttcagacaaagaaacgactaacaatgagaatgaagaacagaactctggtactaaaaga
aggggaccacggacgactattaaggccaagcaactggagacccttaaggctgcttttgct
gccactcctaagcccaccaggcatattcgggaacagctagctcaggaaacagggctaaac
atgcgggtgattcaggtttggttccaaaaccgaagatccaaagaaaggaggatgaagcag
ctcagcgctttgggggccaggaggcatgcttttttcaggagtccaaggcgtatgcgaccc
ctgggaggaaggctggatgagtctgacatcctgaactctgggccttacagctactacgga
gattatcaaggagattattatggaagtggaaattatgacttttttcctcatggaccacca
tcttcccagacacagtccccagcagactctagctacctacagaattctggacctggttca
actcctttaggtcctttagaatctcagctttctggacaccacccttcggaaaaccaaaga
tatgcggacatgatttcccatcctgacactcccagtcctgagccgggtatgactggctcc
ctccattccatttctggtgaagtcttcagtggtggtcctagtcctcccttttctatgtcc
aacaatagtggctttagtggtcctctaccccatcagaaccctgacattaatgaagctact
gtatggtaa
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