Xenopus laevis (African clawed frog): 108717071
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Entry
108717071 CDS
T01010
Symbol
u2surp.L
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108717071 (u2surp.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108717071 (u2surp.L)
Spliceosome [BR:
xla03041
]
Complex A
U2 snRNP components
U2 related factors
108717071 (u2surp.L)
Complex B
108717071 (u2surp.L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
108717071
NCBI-ProteinID:
XP_018119311
Xenbase:
XB-GENE-17336495
UniProt:
A0A8J0VHL8
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Position
5L:128154007..128193206
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AA seq
982 aa
AA seq
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MKLQQPMDIKMPELHAVLYCYYHCDNQQSFLESKLKSFSIGKMSTAAKRTLSKKEQDELK
KKEDEKAAAEIYEEFLAAFEGGDASKVKTFVRGGIVNATKEEHETDEKRGKLYKPSSRFS
EPKSQQSSSERLPPPPVILGEPKKTPIKAKGEKEKKKSNLELFKEELKQIQEERDERHKT
KGRTSRFEPPQTDTDTQRRLTDTPSSRRSRSSSALDDYAPGSHDVGDPSTTNIYLGNINP
QMNEELLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMV
MNFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLMPLPK
NKDDFDKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLF
ENQAPAHVYYRWKLYTILQGDSPTKWKTEDFRMFKNGSFWRPPPLNPYLHGMAEEQEAEP
FVEEPIKKGSLKEEQRDKLEELLRGLTPRKNDIGEAMAFCLNHAEAAEEIVDCITESLSI
LKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKYFEAKLCQVFADLNAAYRAIQGHLQS
ENFKQRVMACFRAWEDWAIYPEPYLIKLQNIFLGLVNIEDKEPEEVPDDLDGAPIEEELD
GALIEDVDGIPIDGAPLDDLDGVPIKSIEDDLDGVPLDINDDSKKDEPIFKVAPSKWEAV
DESELESQAVTTSKWELFDQHEESEEENLNQEEESEDEDDTQSSKSEDQHYYSNPIRDEM
SDSKSMKYSEMSEEKRAKLREIELKVMKFQDEIESGKRPKKPGQSIQEQVEHYRDKLLQR
EREKELERERDKKDKDKAEYRSKEKKDKDESTPTRKERKRRHSGSVSPTRSSSSRRGKSP
SPKSERSERSERSHKDGSRSRSSHKDSPRDVTKKAKRSPSGSRTPKRSRRSRSRSPKKSV
KKSRSQSRSPHRSHKKSKKSKH
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacagcaaccaatggatattaagatgccagaattacacgcggtgttatactgc
tattatcactgcgacaatcagcaatcgtttttggaaagtaaacttaaatccttcagtatt
gggaaaatgagcactgctgctaagagaacactaagcaagaaggagcaagatgagcttaag
aaaaaggaagatgaaaaagcagctgcagagatatatgaagaatttcttgctgcatttgaa
ggaggcgatgccagcaaagtgaaaacatttgtaagaggagggattgttaatgcaacaaaa
gaggagcatgaaacagatgagaagcgaggaaaactatataagccatcttcccggttttca
gaacccaaaagccagcagtctagcagtgagaggctccccccacctccagttatacttggt
gaacccaaaaaaactcctataaaggctaaaggggaaaaagaaaagaaaaaaagtaatttg
gaacttttcaaagaagaactgaagcaaatccaggaggagagggatgaacgtcacaaaact
aaaggtagaacaagcaggtttgaaccccctcaaactgacacagacacgcaacggagatta
acggacacaccatcttcaagaagaagcagatcttctagtgcccttgatgattatgctcct
gggtcacatgatgttggagatccaagcaccactaacatatatcttgggaatatcaatcct
cagatgaatgaagaactgttatgtcaggaatttgggcgttttgggccattggctagtgtc
aaaattatgtggccacggacagatgaggagagggcacgtgagagaaattgcggctttgta
gcattcatgaacagaagggatgctgaaagagctttaaaaaacttgaatgggaagatggtt
atgaattttgagatgaaactgggatggggtaaggctgttcctatccctccccatccaata
tatattcctccgtccatgatggaacacacccttccaccccctccttctggtcttccgttt
aatgcccaacctagagagagactgaagaaccccaatgctcctttgatgccacttccaaaa
aataaggatgattttgataagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttactcgctttgatacatcggatgatcgagtttgtggtgcgtgaagggcca
atgtttgaagcaatgatcatgaacagagaaataaacaatccaatgtttaggtttctgttt
gaaaatcaggctccagctcacgtttattacagatggaaactatatacaatattacagggt
gactccccaacaaaatggaaaacagaagacttcagaatgttcaaaaatggctcattctgg
aggcctccacccttgaatccatacttacatggaatggctgaggagcaggaagctgagcct
tttgttgaagaaccaatcaaaaaaggctcccttaaggaagaacaaagggataaactggag
gagctcttacgagggctaactccaagaaagaatgacattggggaggcgatggcgttctgc
ttgaatcatgctgaggctgctgaagagattgtagactgtataacagagtctttgtctatc
ttaaaaaccccactgcctaaaaagattgccagactttatcttgtgtcagatgttctatat
aattcttctgctaaagttgccaatgcttcatactacagaaaatactttgaagcaaagtta
tgccaagtctttgctgatctcaatgctgcatacagagccatacaaggtcatttgcagtca
gaaaattttaagcaaagagtcatggcttgctttcgtgcatgggaagactgggcaatctat
cccgagccttacttaatcaaattacaaaacattttcctaggacttgtaaatattgaagat
aaagaaccagaggaagtaccagatgatttggatggtgctccaattgaggaagagctggat
ggagcacttattgaagatgttgatggaattccaattgatggtgctccacttgatgactta
gatggtgttcccataaagtctatagaagatgacttggatggagtaccattggacattaat
gatgattctaagaaggacgaacccatttttaaagttgcgccttccaaatgggaagctgtg
gatgaatccgagcttgaatctcaagcagttacaacatcaaaatgggaattatttgaccag
catgaagagtctgaagaagaaaatctcaaccaagaggaagagagcgaagatgaagatgat
acacagagttccaaatccgaggatcagcattattactcaaaccccatcagagatgaaatg
tccgattctaaatctatgaaatactctgaaatgagtgaagagaaacgtgccaaactcagg
gaaattgagctgaaagtaatgaaatttcaagatgaaattgagtctggaaaaaggccaaag
aaacctggacagagtattcaagaacaagttgaacactatcgggacaagcttcttcagagg
gaaagagaaaaggagcttgaaagagagagggacaaaaaagataaagacaaggctgagtat
cggtcaaaagaaaagaaggacaaagatgaatcaactcctaccagaaaagagaggaaaaga
cgccacagtgggtctgtaagtccaacacgaagtagtagcagcaggcgagggaagtcccct
tcaccaaaatcagagcggtcagaaagatcggagagatcccataaagacggttctcgatct
aggtcttctcataaagactcacccagggatgtcactaaaaaggccaaaaggtcaccttct
ggatctaggacaccgaaacggtctcggcggtctaggtcaaggtcgcccaaaaagtctgta
aaaaaatccagatctcagtctagatcccctcacaggtctcacaagaagtcaaagaaaagc
aaacactga
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