Xenopus laevis (African clawed frog): 108717766
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Entry
108717766 CDS
T01010
Symbol
crnkl1.S
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108717766 (crnkl1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108717766 (crnkl1.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108717766 (crnkl1.S)
Spliceosome [BR:
xla03041
]
Complex B
Other components
Prp19-related factors
108717766 (crnkl1.S)
Complex C
108717766 (crnkl1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108717766 (crnkl1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_CcmH_CycH
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
108717766
NCBI-ProteinID:
XP_018120592
Xenbase:
XB-GENE-17343022
UniProt:
A0A1L8G1S0
A0A974CRW7
LinkDB
All DBs
Position
5S:29173739..29186287
Genome browser
AA seq
687 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKTFEDNIRKNRTAISNWIKYAQWEESLKEVQRSRSIYERALDVDYRSITLWLKY
AEMEMKNRQVNHARNIWDRAIIILPRVNQFWYKYTYMEEMLGNVAGTRQVFERWMEWQPD
EQAWHSYINFELRYKEVDRARSIYEKFVIVHPDVKNWIKYARFEEKHGFIAHGRKVYERA
VEFFGEDHMDENLYVAFAKFEEHQKEFERVRVIYKYALDRISKQQAQELFKNYTIFEKKY
GDRRGIEDIIVNKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANVP
PTQEKRHWKRYIYLWINYAFYEELEAKDPERTRQVYQACLELIPHKKFTFSKIWLMYSQF
EIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFAPENCTT
WIKFSELETILGDGERARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEFEKTNNLYRRL
LQRTQHVKVWISFAQFELTSSNDDRLGKCRQVYEEANKSLRNCEEKEERLMLLESWRSFE
EEFGTESTKERVAKLMPEKVKKRRKLQAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KLWKKQQKEDEPGDEPDPDKDIDESNT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagcagcagggaagcagcgaattccaaaagtggccaaggttaaaaacaaa
gcgccagcagaggtgcagataacagccgaacagctgctgagagaggccaaggagagggag
cttgagcttctaccaccacctcctaaacagaagatcacagatgaggaagagcttaatgat
tacaaactaaggaaacggaagacctttgaagataatatcaggaagaacagaactgctatt
agtaactggataaaatatgcacaatgggaggaaagtctaaaggaagttcagagatcgcgc
tctatatacgagcgtgctttagatgtggattacagaagtattacactatggctgaagtat
gcagagatggagatgaagaaccgccaggttaatcatgcacgaaatatctgggacagagca
ataatcatcctacccagggtcaatcaattctggtacaagtatacctacatggaagagatg
cttggaaatgtggcaggaacacggcaagtttttgaacgctggatggagtggcaacctgat
gagcaagcttggcattcttacatcaactttgagctccgatacaaggaggtggaccgagca
aggtctatttatgaaaaatttgtaattgtgcatcctgatgtgaagaactggataaaatat
gctcgctttgaagagaagcatggttttattgcccatgggcgtaaagtttatgagagggct
gttgaattcttcggggaagatcacatggatgaaaacctgtatgttgcatttgctaaattt
gaagaacatcagaaagaatttgaaagagtccgtgtcatctataaatatgccctggacaga
atatcaaagcaacaggcccaagagttattcaagaattacaccatttttgagaagaaatat
ggtgacaggagaggtattgaagatattatagtcaacaaacggaggttccagtatgaagaa
gaagtaaaggccaatcctcataattatgatgcttggtttgattacctgcggctggtggaa
agtgatgctgatcctgatacagttcgagaagtttatgaacgggcaattgccaatgtgcca
cctacacaggaaaagagacactggaagagatacatttatctgtggataaactatgccttc
tatgaggagctagaagcaaaggacccagagagaacaaggcaagtgtaccaggcatgctta
gaactaatccctcataaaaagttcacattttcaaaaatctggttgatgtactcacagttt
gagatcagacaaaaaaatcttccttttgcaagaagagctttgggcacttccattggtaaa
tgtccgaagaacaaactgtttaaaggctacattgaattggagctgcagctgagagaattt
gaccgttgccgaaagctttatgaaaaatacctggagtttgcccccgagaactgcacaaca
tggataaaattttcagagttggagactattttgggtgatggtgaacgagctcgagcaata
tatgaactggctattggacaaccacggcttgacatgcctgaggtgctctggaaatcttac
attgattttgaaatcgaacaagaagaatttgaaaagacaaacaacctttacaggaggctt
ctccaaagaacacagcatgtcaaggtctggattagctttgctcaatttgaattgaccagc
agcaatgatgatagattgggcaagtgcagacaggtctatgaagaagccaataagagcctt
agaaattgtgaggagaaagaggagaggctgatgctgctggaatcttggagaagctttgaa
gaggaatttggcacagaatccacaaaagaaagagtggccaaacttatgccagagaaggtc
aagaagagaagaaaactgcaagcagaagatgggtctgatgcaggatgggaggaatactac
gattatatctttccagaagatgctgccaatcagcccaatcttaaactgcttgcaatggcc
aaactgtggaagaaacagcagaaagaggacgagccgggcgatgaaccagatcctgataaa
gacattgatgagagcaatacttga
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