Xenopus laevis (African clawed frog): 108718117
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Entry
108718117 CDS
T01010
Symbol
trim23.L
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108718117 (trim23.L)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xla04031
]
108718117 (trim23.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108718117 (trim23.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108718117 (trim23.L)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
108718117 (trim23.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
Gtr1_RagA
zf-RING_5
zf-B_box
MMR_HSR1
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108718117
NCBI-ProteinID:
XP_018121234
Xenbase:
XB-GENE-17341430
UniProt:
A0A1L8I246
A0A974E474
LinkDB
All DBs
Position
1L:204599896..204623523
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AA seq
585 aa
AA seq
DB search
MWYDPAVNMAVAVNRHGGPGRMEGSGRQSRTGPGGVVKVLECGVCEDVFSLQGDKVPRLL
LCGHTVCHDCLTRLPLHGRAIRCPFDRQATELGDSGVWGLKKNFALLELLERLQNGASSQ
CSTVEEAMGGSGESIVRCDEDEAHVASVYCTVCATHLCADCSLHTHSTKTLAKHRRVPLA
DKPYEKTLCSQHQVHAIEFVCLEDGCQTSPLMCCVCKEYGKHQGHKHAVLETEASQIRAS
ILDMAHCIRSFTEEISEYSRKLTGIVQQIEGGEQIVEDGIGMAHTEHVPGTAENARSCVR
AYFSDLHETLCRQEEMALSVVDAHVREQLMWLRQQQENMTILLSEVSTACLHCEKALQQD
DCRVVLAKQEITRLLETLQKQQQQFTELADHIQLDSSIPVTFTKDNRVHIGPKMEIRVVT
LGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYY
LNTQAVVFVIDSSHRERVTEAHSELAKLLTEKELRDALLLIFANKQDITGSLSVEEMTEL
LSLHKLCCGRSWYIQGCDARSGMGLYDGLDWLSRQLVAAGVLDVA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtggtacgatccagctgtcaacatggctgtcgctgtaaacagacacggcggccctggg
agaatggaagggagcgggcggcagagccggacaggtccgggaggagtagtcaaggttctg
gagtgtggtgtttgtgaagatgtcttttcactgcaaggagataaagttccacgtttgctg
ctgtgcggccatactgtgtgtcatgattgcctcactcgcctccctcttcatggcagagcc
atacgctgtccatttgatagacaagctactgaactaggagactctggtgtttggggctta
aagaaaaattttgctttgctggaactcctggaacggttgcagaatggtgctagcagtcag
tgtagcactgtagaggaggcaatgggaggatccggagagagcattgtgcgctgtgatgaa
gatgaagctcatgtggcatctgtgtactgtacagtctgtgcaactcatctctgtgcagac
tgctccttacatacacattccactaaaacactggccaagcaccgacgtgtacctttagct
gacaagccttatgaaaagactctgtgctcccagcaccaagtccatgccattgagtttgta
tgtttggaagatggctgccagaccagtcccctcatgtgctgcgtctgcaaagaatatgga
aaacatcaaggacacaagcatgctgttttggaaacggaagccagccagatccgtgcttct
attttggacatggcccactgtataaggtcgtttacagaggagatctccgagtactccaga
aaactgactggcatcgttcagcaaattgaaggaggggagcagattgtagaagatggaatc
ggaatggctcacacagaacatgttccaggaactgcagagaacgcccgctcctgtgtccga
gcctatttctccgacctacatgaaacactttgccgtcaggaagaaatggccctcagtgtc
gtcgatgcacacgtgagagaacagctgatgtggctgcggcaacaacaagaaaacatgacc
attctcttgtctgaagtctcaactgcttgtctgcactgtgagaaggctttgcagcaggat
gactgcagagtggtgttagccaagcaggagatcactcgacttctagagacgctacagaaa
cagcaacagcagtttacagagcttgcagatcacattcagctggactccagtatccctgtc
acattcacaaaggataatagagtccatatcggcccaaaaatggaaatccgggttgtgact
ttgggattagatggagcaggaaaaaccaccattttgtttaagctaaaacaagacgaattc
atgcaacccatcccaacaattggtttcaatgtcgagactgtcgaatacaaaaacctgaag
tttacaatttgggatgttggagggaaacacaaacttaggccattgtggaaacattattac
ctgaatacccaagcggtggtgtttgtgattgacagcagtcaccgggagagagtcacagaa
gcacacagtgaacttgccaagctgcttactgagaaggaactgagagatgctctgctgcta
atatttgccaataaacaggatatcacaggttccctctcagtggaagaaatgactgagctc
ctgagtcttcacaaactgtgctgtggccgcagctggtacatacagggctgtgatgccagg
agtgggatggggctttacgatggtctcgactggctctcaaggcaactggtggcagctggt
gtgcttgatgttgcctaa
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