Xenopus laevis (African clawed frog): 379095
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Entry
379095 CDS
T01010
Symbol
tnnc2.S, tnnc2
Name
(RefSeq) troponin C2, fast skeletal type S homeolog
KO
K12042
troponin C, skeletal muscle
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04020
Calcium signaling pathway
xla04814
Motor proteins
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
379095 (tnnc2.S)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
379095 (tnnc2.S)
04820 Cytoskeleton in muscle cells
379095 (tnnc2.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
379095 (tnnc2.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
379095 (tnnc2.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EF-hand_FSTL1
EH
SPARC_Ca_bdg
TerB
EF-hand_11
EF_EFCAB10_C
SAPC2_N
DUF1456
EF-hand_EFHB_C
DUF5580_M
p25-alpha
VPg
RTX_C
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
379095
NCBI-ProteinID:
NP_001079408
Xenbase:
XB-GENE-865359
UniProt:
O12997
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All DBs
Position
9_10S:complement(31920212..31938793)
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AA seq
163 aa
AA seq
DB search
MAQPTDQQQDARSFLSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQTPTKEELD
AIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAQGKSEEELAECFRIFDKNADGYIDGEELA
EILRSSGESITDEEIEELMKDGDKNNDGKIDFDEFLKMMEGVQ
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcctacagatcagcaacaagatgcgaggtccttcctcagcgaagaaatgatc
gctgagttcaaagccgcctttgacatgtttgacactgatggtggcggtgacatcagcacc
aaggagttgggaactgtcatgaggatgttgggacagaccccaaccaaggaggagttggat
gccatcattgaggaagtagatgaggacggcagcggcactatcgactttgaggagttcttg
gtcatgatggtgcgccagatgaaagaggatgcgcagggaaaaagtgaagaggagttggct
gagtgcttccgcatttttgacaagaatgccgatgggtacattgatggtgaggagttagct
gaaatcctccgttcctcaggggagagcatcacagatgaggagattgaagagcttatgaaa
gatggagacaaaaacaacgatggcaaaattgactttgatgagttcctgaagatgatggaa
ggtgtgcaataa
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