KEGG   Xenopus laevis (African clawed frog): 387262
Entry
387262            CDS       T01010                                 
Symbol
lin28a.S, csdd1, lin-28, lin28, lin28a, zcchc1
Name
(RefSeq) protein lin-28 homolog A
  KO
K18754  protein lin-28
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    387262 (lin28a.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     387262 (lin28a.S)
SSDB
Motif
Pfam: CSD Lin-28A-like_zf-CCHC_2 zf-CCHC CusF_Ec
Other DBs
NCBI-GeneID: 387262
NCBI-ProteinID: NP_001080918
Xenbase: XB-GENE-866059
UniProt: Q8JHC4 B7ZPW6 A0A974DH95
LinkDB
Position
2S:67146875..67166142
AA seq 195 aa
MGSVSNQEITEGLPKSLDGTADIHKSDKSVIFQGSGVCKWFNVRMGFGFLTMTKKEGTDL
ETPLDVFVHQSKLHMEGFRSLKEGESVEFTFKKSSKGLESTQVTGPGGAPCIGSERRPKV
KGQQKRRQRGDRCYNCGGLDHHAKECKLPPQPKKCHFCQNPNHMVAQCPEKAMQAANLED
QPITEEQELIPEIME
NT seq 588 nt   +upstreamnt  +downstreamnt
atgggttctgtctccaaccaggaaattacagaagggcttccaaaatctttggatggcaca
gcagatatacacaagagcgacaaatctgtaatctttcaaggatctggagtatgcaaatgg
tttaatgtacgcatgggttttggattcctcaccatgaccaagaaggagggaactgatctt
gagaccccattagatgtttttgttcatcagagcaagctccacatggaagggtttcgcagc
ttgaaggaaggggaatctgtggaatttaccttcaagaaatcctccaagggtttagaatca
actcaagtgacaggacctggtggggctccctgcattggtagtgaaaggagaccgaaagta
aaagggcagcaaaaaagaagacaaagaggagacaggtgctacaactgtggaggattagac
caccatgccaaggaatgcaagcttccccctcagccaaagaaatgtcatttctgccaaaat
ccaaatcacatggttgcccagtgtccagagaaagccatgcaggctgccaatttagaagat
cagccaatcactgaggaacaggagctcattcctgaaattatggagtaa

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