Xenopus laevis (African clawed frog): 398288
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Entry
398288 CDS
T01010
Symbol
capn11.S, capn1a, capn1a.S
Name
(RefSeq) calpain 11, (mu/I) large subunit a S homeolog
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04141
Protein processing in endoplasmic reticulum
xla04210
Apoptosis
xla04217
Necroptosis
xla04218
Cellular senescence
xla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
398288 (capn11.S)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
398288 (capn11.S)
04217 Necroptosis
398288 (capn11.S)
04218 Cellular senescence
398288 (capn11.S)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
398288 (capn11.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
398288 (capn11.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
398288 (capn11.S)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C2: calpain family
398288 (capn11.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
398288
NCBI-ProteinID:
NP_001082200
Xenbase:
XB-GENE-18005508
UniProt:
Q8UW96
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Position
5S:6247853..6268966
Genome browser
AA seq
724 aa
AA seq
DB search
MIPFGGIASKLKIDRLKASGVGSHDCAVKYQNQDYESLKQQCVESGILFEDPNFPAIPSI
LGFKELGPGSSKTRGVQWKRPSDIVDDPQFIIGGATRTDICQGALGDCWLLAAIGSLTLN
EDLLHRVVPHGQSFQEDYAGIFHFQIWQFGEWVDVVIDDLLPVKDGELVFVHSAECTEFW
SALLEKAYAKLNGSYESLSGGSTTEGFEDFTGGVAEMYELRKAPRDLDKIIKRALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTALKEVNYMGEMEKLIRIRNPWGQVEWTGAW
SDNSSEWNEVDPSEQEDLRLKMEDGEFWMSFQEFLRQFSRLEICNLTPDTLNKEGLSKWH
TTLYDGSWRRGSTAGGCRNNPATFWINPQFKVTLLEEDDDPDDNELACSFLVALMQKNRR
NERKAGQDMHTIGFAVYEVPDEFKGCQNVHLKKDFFLRHQSCARSETFINLREVSTKIHL
PPGEYIIVPSTFEPHKEADFIMRIFTEKHSDIQELDEEVTADLPEEEELTEDDVDDSFKA
MFQQLAGDDMEISVFELKTILNRVVAKHKDLKTDGFGMEACRQMVNLLDKDGSGKLGVVE
FQILWNKFEMAVMALLPACMGPVGINYTPSLQTVFREHDLDKSGTISSYELRIALESSGY
KLNNKLIQVLVARYADSDMGIDFDNFVCCLVKLEAMFKFFKALDEGDGTAEMNLGEWLTM
TMSG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgattccgttcgggggaatagcatctaaactcaagatcgaccgcctgaaggcatccggt
gtgggctcacatgattgcgccgtgaaataccagaaccaggattatgagagtcttaaacag
caatgtgtggagagtggcatcctcttcgaagatccaaatttcccagccatcccttctatc
ctgggcttcaaggaattgggccctggatccagcaaaactagaggcgtgcaatggaagcgg
ccgtcagacattgttgatgacccacagtttatcatcggcggagcaaccagaacagacata
tgccagggggcattgggggactgttggctccttgctgccattggctccctgacgctgaat
gaggatttgctgcacagagtggtaccgcatgggcagagcttccaggaggattacgctggg
atattccacttccagatctggcagtttggtgagtgggtcgatgtggtgatagatgacctt
ttgccggtaaaggatggggagctggtatttgtgcactcagctgagtgtacggagttctgg
agtgccctgctggaaaaggcctatgccaagttgaatggttcatatgagtccctttctggt
gggagcaccaccgagggctttgaggactttaccggaggagttgcagaaatgtacgaacta
cgcaaagcacctcgagacttagataagataataaaacgggcattggagagagggtccctt
ctcggatgttcaatagatataacaagtgcctttgacatggaagctgttacatttaagaag
cttgtgaagggacacgcatactctgtcaccgctctcaaagaggttaattacatgggagaa
atggaaaagcttattcgcatcaggaatccctgggggcaggtggaatggactggagcctgg
agtgataactcctcagagtggaatgaagtggacccttctgagcaggaggacctgcggcta
aagatggaggatggagagttctggatgtctttccaagaattcctgcgccagttttcacgt
ctggaaatctgtaacctgaccccggacacgctaaataaagaggggctgagcaagtggcac
accactctgtacgatggcagttggcgccggggaagcaccgccggtggctgcaggaacaac
ccagccacattctggatcaaccctcagttcaaagtcactctgctggaggaggatgatgac
cctgatgacaatgagttggcctgcagtttcctggtggccctgatgcagaagaaccgacgg
aatgagcggaaggcaggacaagacatgcacaccattggctttgctgtatatgaggttcct
gatgagtttaagggctgccagaatgttcatctgaagaaagatttcttcctgcgccaccaa
tcctgtgcccgctctgaaacctttatcaacctacgtgaagtcagcaccaagatccacctg
ccccctggggagtacatcattgttccctcgaccttcgaaccgcacaaggaggcagatttt
atcatgcgaatattcactgaaaaacattcagatatacaggagttggatgaggaggtgaca
gcagatcttcctgaagaggaggaactcacagaagacgatgtggatgattcattcaaggcc
atgtttcagcagctggcaggagatgacatggagatcagtgtgtttgagctgaagaccatc
ctgaacagagtggtggccaaacacaaagatctgaagacggatggttttggtatggaggcc
tgtaggcagatggtcaatctgttggacaaagatggaagcggcaagttgggagttgtggag
tttcagatcctgtggaacaaattcgaaatggctgtcatggccttgttacctgcatgcatg
ggccccgtgggaataaactacactccatctttacagactgtttttcgagaacacgactta
gacaagtccggcaccatcagctcttatgagctacgcattgccctggaaagttcagggtac
aaactgaataacaagctcattcaggttctggtcgctcgttacgctgattccgacatgggc
attgattttgataacttcgtgtgctgtctagtgaagctggaggccatgttcaagttcttc
aaggcattggacgaaggcgatggcacagctgagatgaatttgggggagtggctgacgatg
actatgagcggataa
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