Xenopus laevis (African clawed frog): 398495
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Entry
398495 CDS
T01010
Symbol
rnf40.L
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
398495 (rnf40.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
398495 (rnf40.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
398495 (rnf40.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
398495
NCBI-ProteinID:
XP_018092198
Xenbase:
XB-GENE-17330240
UniProt:
A0A1L8EZ03
A0A974C115
LinkDB
All DBs
Position
9_10L:124585577..124609269
Genome browser
AA seq
991 aa
AA seq
DB search
MSGAGSKRASSDNGSGPSEKKSNLGDKTPTTLIEPIRLGGISSTEEMDMKVLQFKNKKLA
ERLEQRQGFEDELREKIEKLEKRQATDDATLLIVNRYWSKLDEDVHVLLKSYDTEPSNQS
APPSAPPEEPGKAKETAMEIEEGSEVSQPPPTQDNKAASPEPPPAPPFSAGALPESSLTF
LATLAHSTKEEIELKLQERMAFSKRAVSCVLETSNKLHCRIEELCDRIQSGAEFDNLGES
LQKLNKELLTENRKLQDLATVLQEKHHRLSLQHHELQDRATSTETKVSEMERTIEDLQWD
IEKLRKHEQKLNRHLAEALEQLNSGYHISGSSGSFQGGQTTLSVLKFEMLNAELDQNQEL
ANNRMSELEKLQNELQAAVRLKEKLKLDLRTLPEEAVRNTQDFRCLQSQFSLLYNESLQV
KTQLDEARAVLLSAKNSHLRQIERMESEELSVQKKLRTEVIQLEDTLAQVRKEYEMLRIE
FEQNLAANEQAGPINREMRHLIGSLQNHNHQLKGDVQRYKRKVRDSQAEGSKLRLQIGGP
PCPQPGASGSEPTTPVTVKEEEIEVKKEPPTVVPREPETPTTPEVKKEEEEQKKETERTK
AREREVERERDKDRERDKEKERERDRDKQKTDESKRKDSDILKQLRAEFKKAQESQKEMK
LLLDMYKSAPKEQRDKVQLMAAERKTKAEMEELRVRVQALEEKDRRERKKLADEEALRKI
KMAEEQIDHLQRKLTGTKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLM
SERIKSNQIHKLLREEKEELAEQVQGLKTQVDAQLSQVQKLEERERLLHTSMTSIEKEVT
LRTQSLELNKRKAVEAAQLAEDLKVQVEHVDVTLRDTQNCVCENRSAKEKESFSLKRAQE
DVSRLRRRLEKQKKMEVYADADQILQEEIKEYRARLTCPCCNTRKKDAVLTKCFHVFCFE
CVKTRYESRQRKCPKCNAAFGAHDFHRIYIN
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggctggaagtaagcgagcctcgagcgacaatggctctggtccctcagaaaag
aaatcgaatcttggagataagacacctactactttaattgaacccatacgactcggggga
atctcatcaacggaggagatggatatgaaagtcctgcagttcaagaacaagaaactggct
gagcgcctagagcagagacagggctttgaagatgaactccgggagaagattgagaagctg
gaaaaaagacaggctacggatgacgctactctactcattgtgaaccggtattggagcaag
ctggatgaggatgttcatgtgcttctgaagagttatgatacggagccaagtaaccagagt
gctccacctagcgctcctcctgaggaacccgggaaggccaaggaaactgccatggaaata
gaggaaggctcagaggtatcacaacccccaccgacccaagacaacaaagcagcctctcca
gaacctccccccgctcctcctttttctgctggagcattgccggaatcatctttgaccttc
ttagccacattagcccacagcaccaaagaggaaattgaactgaagctgcaagagcgcatg
gcgtttagcaagagggctgtatcctgcgttctggaaacttctaacaagctgcactgccgc
atagaagagctgtgtgaccgaatccaaagtggtgctgagtttgataacttgggggaatct
ctgcaaaagctgaacaaagaacttcttactgagaaccgtaagctgcaggaccttgctact
gtactccaggagaagcatcaccgcctctcactgcagcaccatgagctccaagaccgcgca
acttcaacagagaccaaggtatccgagatggagaggaccatcgaggacttgcagtgggac
attgagaaattacgcaaacatgaacagaagttgaaccgtcacctggcagaggccctggag
cagcttaattctggataccacatctccggaagttctggaagtttccagggaggacagact
accctaagtgtgctaaagtttgagatgctgaatgcagaactcgatcaaaatcaggaactg
gcaaacaatcggatgtcagagttggaaaaactgcagaatgaactacaggcagctgtcagg
cttaaggagaagctaaagctggatctgaggaccttgcctgaggaagcagtacggaacaca
caggatttccgctgcctgcagtctcagttctctctcctgtacaacgagtctttgcaagta
aagactcaattggatgaggcccgagctgtgctgttaagcgccaagaacagtcacctgagg
cagattgagcgcatggagagcgaggagctgtctgtacaaaagaaactgcgcactgaagtg
atccagctggaggatactctcgcccaggtacgcaaggagtatgaaatgctgaggatagag
tttgagcagaacctggcagccaatgagcaagcaggtcctattaatagggagatgagacat
ctcatcggaagcctccaaaaccacaaccaccaactgaagggcgacgtgcagagatataag
cgcaaggtgcgagattcccaggcagaggggagcaagttgcggttgcaaattggcggcccg
ccctgtcctcagcctggagcttccggatcagaaccaactacccccgttactgtgaaagag
gaagagatagaagtgaagaaagaaccccctacagtggtgccacgagagcccgagactccc
actacccctgaagtgaagaaggaggaggaagagcaaaagaaagagacagagcggaccaag
gcgcgagagagggaggtggaacgagaacgagacaaagatcgggaaagagacaaagaaaag
gaaagagagcgggacagagacaaacagaaaacagatgaaagcaaaaggaaagacagcgac
attctgaaacagctccgagcagagtttaagaaggcccaggagagccagaaggagatgaag
ctgctgttagatatgtacaaatctgcccccaaagagcagagagacaaggtccagctgatg
gcagctgagagaaagaccaaggctgagatggaggagctgcgagtccgggtgcaagctctt
gaggagaaagacaggagggagaggaagaagcttgcagatgaagaagcactgagaaaaata
aaaatggctgaagaacagatagaccatttacagaggaaactgactggcaccaaacaggag
gaggaggccttactttcagagatggacgtgacgggccaggcgtttgaggacatgcaggag
cagaatattcgcctgatgcagcagctccgtgagaaggacgacgccaacttcaaacttatg
tctgagaggatcaaatccaaccagatacacaaactcctgagggaagagaaggaggagctg
gctgagcaggtgcaagggctgaaaactcaggtggatgctcagctgtctcaggtgcaaaag
ctggaggagagagagcgccttttacacacatctatgacttccattgagaaggaggtaacg
cttagaacacaatcactggaactgaacaagaggaaggcagttgaggcggctcagcttgca
gaagacctgaaggtacaagtggaacacgtagacgttactctgagagacacccagaactgt
gtatgtgagaaccgaagcgctaaagaaaaggagtccttcagtctcaaaagagctcaggag
gatgtctctcgtctgagaaggagactggaaaagcagaagaagatggaggtttatgcagat
gccgaccaaatcctacaggaggagattaaagagtacagggccagactcacttgtccttgc
tgcaacacgcggaaaaaggacgccgtcctcaccaagtgctttcacgtcttctgcttcgag
tgcgtcaagacccgatacgagtctcggcagcgcaagtgccccaagtgcaacgcggccttc
ggagctcacgactttcaccggatttacatcaattaa
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