Xenopus laevis (African clawed frog): 399159
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Entry
399159 CDS
T01010
Symbol
ufd1.L
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
399159 (ufd1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
399159 (ufd1.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
399159 (ufd1.L)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
399159
NCBI-ProteinID:
XP_018117558
Xenbase:
XB-GENE-17330398
UniProt:
Q6INJ6
A0A974I4Z1
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All DBs
Position
1L:complement(167486751..167501253)
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AA seq
307 aa
AA seq
DB search
MFSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGVCYLPHWMMQNLLLEEEGLLQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPDRHTQQEEQTEIEPDHSEYAADLGFRAFSGSGNRLDGKKK
GIDPSPSPLKPEDIRRGIPNYDFKIGTITFIRNSRPQTKKVEEDDTANQFIAFSGEGQSL
RKKGRKP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaacatgtttgaccacccgattccccgggtcttccaaaaccgcttctct
actcagtaccgttgttactcagtttccatgttggcagggcccaatgaccgatctgatgtg
gagaaaggagggaagataatcatgcctccatctgctctagatcagctcagtcgtttgaac
attacttaccccatgctcttcaagctgacaaataaaaattctgacaggatgacacattgc
ggtgttcttgaatttgtcgcagatgaaggagtatgttatttgcctcattggatgatgcag
aatttgctgctagaagaagaaggattgttacaggtggaaagtgtcaatcttcaagtcgcc
acatattcaaaattccagccacagagcccagatttcttggatattactaaccccaaagct
gtactggagaacgctctgaggaattttgcttgtcttaccactggagatgttatcgccatt
aactacaatgaaaagatctatgagcttcgagttatggagacaaaacctgacaaagctgtg
tccatcatagaatgtgatatgaatgttgattttgatgcccctctgggatacaaggaacca
gacagacatacacagcaggaagaacaaaccgaaatcgaaccagaccacagtgagtatgca
gcagaccttgggttcagggcattttctggctctgggaaccggttggatggaaaaaagaag
ggaattgaccccagtccttcaccattaaagccagaagacatacgaagaggaattccaaat
tacgacttcaagattggaacaatcacgttcatcagaaattcaagaccacagacaaagaag
gtggaagaagatgataccgctaaccagtttattgcattttctggagaaggacagtctttg
aggaagaaaggcagaaaaccataa
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