Xenopus laevis (African clawed frog): 446406
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Entry
446406 CDS
T01010
Symbol
ttc37.L, ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
446406 (ttc37.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
446406 (ttc37.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
446406 (ttc37.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_14
TPR_8
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_11
TPR_12
ANAPC3
TPR-S
TPR_15
RMD1-3
HAT_Syf1_M
TPR_EMC2
BTAD
Motif
Other DBs
NCBI-GeneID:
446406
NCBI-ProteinID:
NP_001086571
Xenbase:
XB-GENE-5929219
UniProt:
Q6DFB8
LinkDB
All DBs
Position
1L:192591381..192653052
Genome browser
AA seq
1564 aa
AA seq
DB search
MSNKEVKAILKNARDAIRNKDYKEVLKQCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
AAYRKAVEIEPDQLLAWQGLGNLYEKVNQKDFKEDLPNVYQKLLELYRSSDKQKWYEICK
KLSDLYQQEKNYVPAAHTWHQLIKMKEDESIKSNELYPLWKRMTELLSEDVEKLDNETQE
LLLNAFESAIPCIEEIPSEEHQMLYQHYITCLSKLPLEEAKLKKVCENMITVYPSLIYPL
KVLALHYIKSGDITEEAICCYSKLLELDPLNGPGLIGMGIKALHDRNYVLASENLSKGLK
DVNCCPSAWCCLAQAQLKIHKYAEALVSCDQAINGATQDNSAPQSVVQKDAAFRLKAEAL
VEGNSSNNAEEALKALEQISNADNNPEICAIKGQAYLKKGCIDVASKISEELRLSHEHLA
EGHFLEGLLQYIQKNYSAAEISLQYALERKPENAVYHYYLGLNYWFMSKETRRDKTKAVT
QFLKAAKMDPFMSRAFYYLGHYYSEVAGDKSRARGCYKKAFELDDSDGEAGAAAVDLSME
LGDMDVALAILTSVTERADAGTAKWAWLRRGLFYLRVGQHSKSVSDLHAALRADPKDSNC
WECLGEAYLSRGGYTTALKSFMKASELNPDSIYSVYKIASIKQILGTYKEAVNEYQQILM
KSGEYVPALKGLGECHLMLAKSALSDFLDLKAVDAIEKAIEFLARAIRLRPDLLCLWKLL
GDACTCIYAVTHSSVKVNVLGILLGNDEEQQLLNKPEVLALGGRCYGRALRIQSTANLWC
DLGINYYYQSQHLMGYDSLTNDASELLEKSQQCIKKAVMVESGNHQFWNALGVVSCSKGM
GNNALAQHAFIKSIHCEQNNVAAWTNLGALYLMNGNIELSHQAFKVAQSLDPLYVRCWIG
QALIAETVGSHETMDLFRHTTELSMHVEGAKGYAHWVCTTLQDKNNRNTALYRYNIVQMN
AITAAHLALSKYTERIQNDRTAFEMLGYLNEHLNLKKQASESYRRVVSILQEREDKESSN
SALQHYGRSLCAVGQYQEAIQTFSSTPLTEFDDLTGIALAFFKKGLLQESMKAYKQALSV
AKSDQEKAHILTALAIIEYNRGEFDTAKTLLFKCSVLKEPSIESLQSLCALGLAKRDVTL
ATAALNELLKHVKIKDNIYERCLITSAIYVLQGRNEAAQRQACRDIHSHPGNPELWAFLS
RLVPQHVPRDAKGGAVAGTVAYTLNINHSKKALLYAAVNELSAGALLADDRKKNALNTLQ
RAAHFFPDNPAVWASLMAACEAENTASYLNKKSNKKTDLSLTFLASVKSKTEGMKAVPAS
YTQTLRSWSLCQAICALKDQGRISEAEALCTKSIQNCPDQTPFFLLLRQIQCKQLQSQAQ
ISEPVLEELKKTVLSNFTSHNAWHWLAEVYQSLGMMMDAEMCYRKSLQLASQQGNWNGKL
SSLLRLALLALKVCMAKIPDSRWPGLLQEATSEVLKMTFCPLAVLLQGILQFSTKGSRKT
RQLLEKVVYQSGCSDTIAFVARWYLLRHLHGKNDDQLVEVLLDNAKAHGDTRIIDLHKQL
TESS
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaagtgaaggccatactaaagaatgccagagatgccatcagaaataaa
gactacaaagaagtcctcaaacaatgcaaggctgtgttaaagctggaaaagaacaactac
aatgcttgggtgttcattggcttggcagcatctgaattggagcaaccagatcaagcccag
gcagcttacaggaaagcagtagagattgaacctgaccaattacttgcctggcagggactt
ggaaatttatatgaaaaagtcaaccaaaaggattttaaggaagatttaccaaatgtgtac
caaaagcttctggagctgtacagaagctctgacaagcaaaaatggtatgaaatatgcaaa
aagctttcagatctctatcagcaagaaaagaattatgtgccggctgcacacacatggcat
cagctgatcaaaatgaaagaagatgaaagcatcaagtccaatgaactatatcctctttgg
aaaaggatgacggagcttttgagtgaagatgtggaaaagctggataacgagactcaggaa
ctgctgctgaatgcatttgaaagtgctatcccctgtatagaagagattccaagtgaggag
caccagatgctctaccagcactatatcacatgcttgtctaagcttcctcttgaagaagcc
aaactgaagaaggtctgtgaaaacatgattactgtgtatccatcccttatttatcctctg
aaagtactcgccttgcactacataaaatctggtgatatcactgaagaggctatatgttgc
tacagcaagcttctagaacttgatcccttgaatgggcctggacttattggaatggggatc
aaagctctacatgacagaaattatgtactggcttcagaaaacttgtctaaagggctgaaa
gacgtgaactgctgcccttctgcttggtgttgcctggcacaggctcaactgaaaatacac
aagtatgctgaggctcttgtatcctgtgatcaagcaataaatggtgccacgcaagataat
tctgcacctcaatccgttgttcaaaaagacgcagcttttcggttgaaggcagaagcgtta
gtagaaggcaacagctcaaacaatgcagaggaagcactaaaagcccttgagcagatttct
aatgcagataataatccagaaatttgtgctattaaaggacaagcttatctaaagaaaggc
tgtatagatgtagcttcaaagatttcagaagagcttagactgtcacatgaacatttggct
gaaggacattttctggaaggtctgcttcaatatattcagaaaaactactctgctgcagaa
ataagtttgcagtatgctcttgagaggaagccagaaaatgcagtgtatcactattatctg
gggttgaattattggtttatgagcaaagagacaaggagggacaaaacgaaagctgtgacc
cagtttttaaaggctgccaaaatggacccttttatgtctagagcgttttattatctaggt
cattattacagtgaagtagctggtgataaaagccgagcacgtggctgctacaaaaaagca
tttgaacttgatgactcggatggtgaagctggtgcagccgcagttgatctgagcatggag
ctaggagatatggacgtggctttagccattttaacaagtgtaacagaaagagcagatgca
ggaacagctaaatgggcttggcttcgaagaggtctgttttacttgagagttggtcagcat
tccaaatcagtgtctgacttacatgctgccctgcgagcggatccaaaggactcaaactgc
tgggagtgtttaggagaagcctatttgagcagaggaggctacacaacagccctgaaatcc
ttcatgaaagccagtgaactgaaccctgactccatttacagcgtatataagatagcttcc
attaaacaaatcctgggaacctacaaagaggcagtgaatgaatatcagcaaattctaatg
aagtctggtgaatatgttcctgcacttaaaggcctaggagagtgccatttaatgcttgcc
aaaagtgctctttcagacttcttggatttaaaggctgttgacgctatagaaaaagctatt
gaatttctggctagggctatacggcttcgccctgacttattgtgcctgtggaagctcctc
ggagatgcgtgtacatgtatatatgcagtcacacattcaagtgtcaaagtaaatgtcctg
gggatactgctcggtaacgatgaagaacaacagctcttaaacaaacctgaagtgttggca
ctaggaggaaggtgttatggccgtgcattgaggattcagtccacagcaaatctctggtgt
gaccttggcatcaattattattaccagtcccagcacttgatgggttacgatagcttaaca
aatgatgccagtgagttattagaaaaatctcagcagtgtatcaagaaagctgtaatggtg
gaaagtggaaatcaccaattttggaatgcccttggtgtggtctcttgttccaaaggtatg
ggcaacaatgctctggcacaacatgcattcatcaaatcaattcactgtgagcaaaataat
gtggcagcttggacaaacctgggggctttatatttgatgaatggaaatattgagctaagc
catcaagcattcaaagtagcgcaatctcttgacccgttatatgtaagatgctggattggt
caggctttaatagcagaaacagttgggagccatgaaaccatggatctgtttagacataca
actgaactaagtatgcacgttgaaggagcaaaaggatatgcccactgggtctgtacaact
ctccaagataaaaacaacagaaacacagcactgtaccggtataacattgtacagatgaac
gccatcactgcagctcaccttgctttaagcaagtatacagaaaggatccaaaatgaccgg
actgcttttgaaatgctcggctatttaaatgagcacctgaacctgaaaaagcaagcgagt
gaatcttaccgtagagtggtttccattctgcaagagagagaagacaaggagagctctaac
tccgctcttcaacattatggacggtcactctgtgctgtagggcagtaccaagaggccatc
caaaccttctcctccacccctctgactgagtttgatgatctcaccggcattgctcttgct
ttcttcaaaaagggacttttacaggaaagcatgaaagcttacaagcaagcgttgtctgtt
gccaagtcagatcaagagaaagcacatattctcacagccctggcaataattgaatataat
cgaggtgaatttgatacagccaagactttgcttttcaaatgctctgttttaaaggagccg
agtattgaaagcctgcagtcactgtgtgcgctgggactggcaaaacgcgatgttactctc
gcaacggccgctctcaatgagcttctcaagcatgtcaagattaaagacaacatttatgaa
agatgcctcattacttctgccatatatgtactgcaaggcagaaatgaggctgcacagagg
caagcttgtcgagatattcacagtcaccctggaaatccagagctgtgggcgttcctctca
aggctggtccctcagcatgtccctagagatgcaaagggtggagcggttgctggaactgtg
gcgtatacactcaatattaaccattcaaagaaggccctgttatatgcagcagtaaatgaa
ctgtcagctggggctctccttgctgatgatcgcaagaaaaatgccctaaacactttgcaa
agagcagctcatttcttcccagataacccagcagtttgggccagcttaatggctgcctgt
gaggcagagaatacagcctcgtatcttaataagaagagtaacaagaaaactgacctgagt
ctgactttcctggcctctgtgaaatccaagactgaaggtatgaaggctgttcctgctagt
tacacacagacactgaggagctggtcattgtgtcaggcaatttgtgctttaaaggatcaa
ggtcgaatttcagaagcagaagctctgtgcacgaagagcattcaaaactgtccagaccag
acacccttctttctgcttttaagacaaattcagtgcaaacagctccagtcccaagcgcag
atttctgaacctgttttagaagaactgaagaaaacagtcttgtctaatttcacttcacac
aatgcctggcattggctcgctgaggtgtatcagtccttggggatgatgatggatgcagag
atgtgctacaggaaaagtttacagttggcatcacagcaaggcaactggaatgggaaactc
tccagcctgctgcgattagccctccttgcgctcaaggtttgcatggctaagattcctgat
agtcgatggccaggacttttacaggaggctactagtgaggtgctaaaaatgacattttgt
cctctagcggttcttcttcagggaattctccagttcagtacaaaaggctcaaggaaaacc
cgccagctacttgagaaagtggtgtatcaaagtggctgcagtgataccatagcatttgtt
gcccgctggtatctcttgaggcatctgcatggcaaaaatgatgatcagttagtggaggtg
ctgctagataatgccaaagcccatggagacaccagaataatagatctgcacaagcaactg
accgaatcatcataa
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integrated database retrieval system
