Xiphophorus maculatus (southern platyfish): 102218925
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Entry
102218925 CDS
T02923
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102218925 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102218925 (crnkl1)
03036 Chromosome and associated proteins [BR:
xma03036
]
102218925 (crnkl1)
Spliceosome [BR:
xma03041
]
Complex B
Other components
Prp19-related factors
102218925 (crnkl1)
Complex C
102218925 (crnkl1)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102218925 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
102218925
NCBI-ProteinID:
XP_005816167
Ensembl:
ENSXMAG00000006896
UniProt:
M3ZXH9
LinkDB
All DBs
Position
15:complement(5023896..5029832)
Genome browser
AA seq
747 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDKEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVMVHPEVKNWIKYARFEERHGYVAHSRKVYERA
VEFFGEEYVDENLFVAFARFEETQKEFERVRVIYKYALDRIPKHQAQELFKNYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDADTVREIYERAIANVP
PIQEKRHWRRYVYLWINYALYEELETKDPERTRQVYQACLELIPHKKFTFAKIWLLFAQF
EIRQKNLPGARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDVERARAIFELAISQPRLDMPEVLWKSYIDFEIEQEQFENTRSLYKRL
LQRTQHVKVWISYAKFELSVDEPDRLQRSRQTYEDANKSMRSCEEKEERLMLLESWRDFE
REFGSDGTRERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQAKDDEEEEEEEEEEEERPANPPEEEEQEEERSEDPAAAPDKPPEGEAQMEKTY
DDRDDSSSSESEEEDGGKKRGSEEDKE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagcggcgggaaagcagcgcataccgaaggtggcgaaggtgaagaataaa
gctcctgcagaggttcagatcactgctgagcagctgctcagagaggccaaagagagggag
ctcgagcttctgcctcctccgcccaaacagaagatcactgataaagaggagctcaatgac
tacaagctgaagaagaggaagggctttgaagacaacatcagaaagaaccggaccgtcatc
agtaactggattaaatacgcacaatgggaggaaagcctgaaggagatccagagagctcgg
tccatctacgagcgagcgctggacgtcgatcacagaaacatcactctgtggctgaagtac
gcagagatggagatgaagagccgccaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcctgccccgggtcaaccagttctggtacaaatacacctacatggaggagatg
ctgggcaacgtggccggctgcaggcaggtgttcgagcgctggatggagtgggagccggag
gaacaggcctggcactcctacatcaactttgagctgcgctataaggaagtggacaaagcc
cggagcatctatgagcgattcgtcatggtccaccccgaggtgaagaactggatcaagtac
gctcgcttcgaggagaggcatggctacgtggcgcacagcaggaaggtgtacgagcgagcc
gtggagttcttcggggaggaatacgtggacgagaatctgtttgtggccttcgccaggttc
gaggagacccagaaggagtttgagcgggtccgagtcatctacaagtacgccctggacagg
atccccaagcatcaggcgcaggagctcttcaagaactacaccatgtttgagaagaagttc
ggagaccgcagaggaatcgaggacgtcatcgtcagcaagagaaggttccagtacgaagag
gaggtcaaggcaaacccacacaactacgacgcctggttcgactacctgcgcctggtggag
agcgacacggacgccgacacggtgagagagatctacgagagagccatcgccaacgtgccg
cccatccaggagaagagacactggaggcgctacgtctacctgtggatcaactacgccctg
tacgaggagctggagaccaaggaccctgagaggacgaggcaggtctaccaggcgtgtctg
gagctcatccctcataaaaagttcaccttcgcaaagatttggctgctctttgcccagttt
gagatccgacagaagaacctgccaggagccagaaagatcatgggcacggccatcgggaaa
tgtcccaagaacaagctgctgaagggctacatcgagctggagctgcaactgcgagagttc
gaccgctgcaggaagctgtatgagaagtacctggagttcagcccagagaactgcaccacc
tggatcaagttcgccgagctggagaccatcctgggtgacgtggagcgagcccgcgccatc
tttgagctcgccatcagccagcccagactggacatgcctgaggttctctggaaatcctac
atcgactttgagatcgagcaggagcagtttgagaacacgaggagcctctacaagaggctg
ctgcagcgcacgcagcacgtcaaggtctggatcagttacgccaagttcgagctgtcggtg
gacgaacccgaccggctgcagcgcagccgccagacctacgaagacgccaacaagagcatg
aggagctgcgaggagaaggaagagcgactgatgctgctcgagtcctggagggactttgag
agggagtttggctccgacggcaccagggagcgagtccggaagctgctgccggagaaggtg
aagaagaggaggaagctgacagccgaggacgggtcggacgccggctgggaggaatactac
gactacatcttccctgaggacgccgccaaccagcccaacctcaagctgctcgccatggcc
aagatgtggaagaggcagcaggccaaggacgacgaagaggaggaggaggaggaagaagag
gaggaggagcgtcctgcaaaccctccagaggaggaagagcaggaggaagagcgctctgag
gacccggcagcagctcctgacaaaccgccggagggcgaggcccagatggagaaaacgtac
gacgaccgagacgacagcagcagcagcgagagtgaggaagaggatggagggaagaaacgg
ggcagtgaggaagacaaagagtag
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