Xiphophorus maculatus (southern platyfish): 102220172
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Entry
102220172 CDS
T02923
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04020
Calcium signaling pathway
xma04814
Motor proteins
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102220172
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102220172
04820 Cytoskeleton in muscle cells
102220172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102220172
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
102220172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
EH
AIF-1
SPARC_Ca_bdg
EF-hand_11
p25-alpha
EF_EFCAB10_C
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
102220172
NCBI-ProteinID:
XP_005806263
Ensembl:
ENSXMAG00000016566
UniProt:
A0A3B5PTB9
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All DBs
Position
1:4197112..4203705
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AA seq
161 aa
AA seq
DB search
MPTDAQTDARSFLTEEMISEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFVDREEFGDI
LHMTGEQVAEEDIDEMFGESDSNKDGKIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgacgcccaaactgacgcccgctccttccttactgaggagatgatttcagag
ttcaaggctgccttcgacatgttcgacacagatggtggcggtgacatcagcaccaaggag
ctgggcaccgtgatgaggatgctgggccagaacccatctagagaggagctggacgccatc
attgaggaggtggatgaagacggcagcggtaccattgactttgaggagttcctggtcatg
atggtgcagcagctaaaggaggaccaggccggaaagagcgaagaggagctttcagaatgt
ttccgcattttcgacaagaacggagacggcttcgttgaccgggaagaatttggagatatc
ctccacatgacgggagagcaggtcgcagaggaagacattgatgaaatgttcggcgagtca
gactccaacaaagacggaaaaattgattttgatgagtttctcaagatgatggagaatgtc
cagtga
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