Xiphophorus maculatus (southern platyfish): 102221968
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Entry
102221968 CDS
T02923
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04145
Phagosome
xma04210
Apoptosis
xma04517
IgSF CAM signaling
xma04530
Tight junction
xma04540
Gap junction
xma04814
Motor proteins
xma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102221968
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102221968
09143 Cell growth and death
04210 Apoptosis
102221968
09144 Cellular community - eukaryotes
04530 Tight junction
102221968
04540 Gap junction
102221968
09142 Cell motility
04814 Motor proteins
102221968
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102221968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102221968
03036 Chromosome and associated proteins [BR:
xma03036
]
102221968
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102221968
04147 Exosome [BR:
xma04147
]
102221968
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102221968
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
102221968
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
102221968
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102221968
Exosomal proteins of other body fluids (saliva and urine)
102221968
Exosomal proteins of colorectal cancer cells
102221968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
102221968
NCBI-ProteinID:
XP_005815630
UniProt:
A0A3B5PY84
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All DBs
Position
9:complement(17279120..17281861)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHIGQAGVQIGDSCWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGTGK
HVPRAVFVDLEPSVIDEVRTGTYRQLFHPEQMITGKEDAANNYARGHYTIGKEIIDQVLE
RIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICQRNLGIDRPAYSNLNRIISQIVSSVTA
SLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPVISAEKAYHEQLTVAEITNSCFEPAN
QMVKCDPRMGKYMACCLLYRGDVMPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKLQRAVCMLSNTTAIAEAWARLNHKFDLMYTKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGADSMGEEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctgtacacatagggcaggctggtgtccagattggtgattcttgc
tgggagctctactgtttggaacatgggatacagccggatggacagatgcccagtgacaaa
accgttggaggaggagatgactctttcaatacgttcttcagtgagactggaactgggaag
catgtccccagagctgtttttgtagacctcgagccctctgtcattgatgaagtgcgtact
ggaacataccgccagctgtttcatcctgaacagatgatcactggtaaggaagatgcagcc
aacaactatgcccgtggacactacaccattggaaaagagatcatcgaccaggttctggaa
aggatccgcagactgtctgaccagtgcactggccttcagggcttcctgattttccatagc
tttggtggaggaaccggctctggttttacctccctgctaatggagcgtctttctgtggac
tacggcaagaagtccaaacttgagttttcaatctacccagctcctcaggtgtccactgct
gtggtggagccttacaactctgtcttgaccacacacaccaccctggagcactccgactgt
gcgttcatggtggacaatgaggcaatctacgacatctgccagagaaaccttggcattgac
cgtcccgcctacagcaacctgaacaggatcatcagccagatcgtgtcctctgttactgct
tctcttcgtttcgatggtgccctgaatgtggatctgacagagttccagaccaacttggtg
ccatatccccgcatccacttccctatggccacatacgcccctgtgatctcagccgagaag
gcgtatcacgagcagcttacagtggctgagattactaactcctgctttgagcctgccaat
cagatggttaaatgtgacccccgcatgggcaagtacatggcttgctgccttctgtaccgc
ggcgacgtgatgcccaaagacgtcaatgctgccattgctgcaatcaaaacaaaacggtct
atccagtttgtagactggtgtccaactggtttcaaggtaggcatcaattaccagccaccc
actgtggttccggggggagacctagccaagctccagagggcagtgtgcatgctgagcaac
accacagctattgcggaagcctgggctcgacttaaccacaagtttgacctgatgtacacc
aagcgggcctttgttcactggtatgtaggggaagggatggaagagggtgaattctctgag
gccagggaggatttggcagctctagagaaggactatgaggaggttggagctgatagcatg
ggagaggaagatgaaggagaagaatattga
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