KEGG   Xiphophorus maculatus (southern platyfish): 102222413
Entry
102222413         CDS       T02923                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102222413 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xma03041]
    102222413 (sf3a1)
Spliceosome [BR:xma03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102222413 (sf3a1)
 Complex B
    102222413 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    102222413 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 102222413
NCBI-ProteinID: XP_005814822
Ensembl: ENSXMAG00000002753
UniProt: A0A3B5PTY0
LinkDB
Position
12:24572764..24579065
AA seq 784 aa
MPPGPVQIVQPETNNKQNDGPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFE
ARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQAMQQSQQL
PQKVQVIQETVVPKEPPPDFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPKEVMDQVRYRVEWA
KYQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPIEQGHFPPPTTPEELGARILI
QERYEKYGESEEVEMEVESEDEEDEREKRADGQPSQPDQDTQVQDMDEGSDDEDEGMKAP
LPPDNPMPPPLPPAPEQVIIRKDYDPKASKPQPSVAAPDEYLISPITGEKVPASKMQEHM
RIGLLDPRWLEQRDRSIRDRQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDETKEKIGPSK
PSEIHQPPPIPSSAPSLPKPSPPVTAVPRPSISVAPPVRTTLLSAVPVIPRPPVTPVVRL
APGQVITQMPPMIPAPRVNVVPMPPAPHLMAPRPPPMVVPTAFVPAPPMPQPPSAAPAPP
IHPPPPHEDEPMSKKMKTEDNLIPEEEFLRRNKGPVAIKVQVPNMQDKTEWKLNGQVLNF
TVPLTDQVSVIKVKIHEATGMAAGKQKLQYEGIFIKDSNSLAYYNMTNGSIIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgccgcctgggcccgttcagatagttcagccggagaccaacaacaagcagaatgatgga
cctgcagaagagactccagccactaagcccatcgttggcatcatataccctcctccagaa
gtccgaaacattgtcgacaagacggccagttttgttgccaggaatggaccagagtttgaa
gcaagaatccgtcagaatgagatcaacaaccccaaatttaatttcctcaaccccaacgat
ccctaccatgcttactaccgccacaaggtcaatgaatttaaggagggcaaggcacaagaa
ccatctgcagcagtgcctaaggtcatgcagcagcaagccatgcagcagtcccagcagctt
cctcaaaaggtgcaggtgattcaggagaccgtggtccccaaagagccaccccccgacttt
gagttcattgcggaccctccatcgatctctgcgtttgatctggatgttgtgaagctcact
gcccagtttgtggctcgcaatggccgacagtttctcacccagctgatgcagaaggagcag
aggaactaccagtttgactttctgcgaccacagcacagcctcttcaactatttcaccaaa
ctggtggagcagtacacgaagattttgatccctcccaaaggcctgctaatcaaacttaaa
aaagaagctgagaacccaaaggaagttatggaccaggtgaggtaccgtgtcgaatgggca
aaataccaggagcgtgagagaaagaaggaggaagaggagagggagaaggaacgggtcgct
tacgcccaaatagactggcatgattttgtggtggtggagacggtggatttccagcccatt
gaacaaggtcatttccctccacccacgacaccagaggagcttggtgctcgcatccttatc
caggagcgctacgagaaatacggagaaagcgaggaggtggagatggaggtggagagtgag
gatgaagaggatgaacgagaaaagcgggctgacggccagccttctcagcctgatcaagac
acacaggtccaggacatggatgagggatctgatgacgaagatgaaggtatgaaggctcca
ttgccaccagacaacccgatgccaccccccctgcctccagctccagaacaggttattatt
cgcaaggactacgaccccaaagcttccaagccgcagccctcggttgcagctccagatgaa
taccttatttcaccgatcaccggtgagaaagtccccgccagtaagatgcaggagcacatg
cgcatcggcctgttggatccgcgctggcttgaacagagagaccgaagcattagagacagg
cagacggaggatgaagtctatgctcccggtttggatattgagagcagcttgaagcagctc
gctgagaggcgtactgatatctttggtgtggaagagacagccatcggaaagaagatcggc
gaggaggaaattcagaagccagaagaaaaggtcacctgggatggccactcggggagcatg
gctcgtacgcagcaggcagcgcaggccaacatcactctgcaggagcagatcgaagccatt
cacaaggccaaaggactggtgggagaggatgaaacgaaggaaaaaattggtcccagcaag
ccgagtgaaattcatcagcctcctcccatcccctcatcggcaccaagtctgcctaaaccc
agtcctcctgtcacagcggtgccacgcccatctatctcagtggctcctccagtccgtacc
actctgttgtctgccgtacctgtgattccacggcccccggtgactcccgtggtgcgtttg
gcgccaggtcaagtcattacacagatgccgcccatgattcctgctcctcgtgtcaacgtg
gttcccatgccaccagcgccccacctcatggccccaaggccaccccctatggttgttcca
actgcgtttgtccccgctcctcccatgcctcaaccacccagcgctgccccagcgccgccc
atccacccaccccctcctcatgaggacgaacctatgagcaagaagatgaagactgaggac
aacctcatcccagaggaagagttccttcgtcgaaacaagggtcctgtggcaatcaaagta
caagtccccaacatgcaggacaagaccgaatggaagctaaatggccaagtgttgaatttc
actgtcccacttacagaccaggtgtctgtcattaaagtcaaaatccatgaggcaacaggc
atggcggctggaaaacagaagttgcagtatgagggcatcttcatcaaggattcaaactct
ctggcttattacaacatgaccaatggttccatcattcatttggctctgaaggagagaggt
ggaagaaagaagtga

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