Xiphophorus maculatus (southern platyfish): 102229401
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Entry
102229401 CDS
T02923
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102229401
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
102229401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
102229401
NCBI-ProteinID:
XP_005799548
Ensembl:
ENSXMAG00000013191
LinkDB
All DBs
Position
23:complement(6917984..6921392)
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AA seq
272 aa
AA seq
DB search
MYVGYLLDKESGMYHQGPVRRSSINLPPQNFVSSPQYPDFTGYHHVPNMDTHAQSGASWG
PSYGAPREDWGAPYSLGPPNNLPPPMNNSSPGQVPYCSSEYSHMHPPGAAVLQPPPDNVT
VAQLSPERERRNSYQWMSKTAQASSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKLGQSDGSSGSVHSDPGSVSPLPVPGS
LSPTEIHGSLYPPQGMNTLPSIRNIQQVTVTQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtacgttggatacttactggataaagaaagcggaatgtatcaccaaggaccagtaaga
agatcaagcatcaatctacctccacagaacttcgtttcgtctccacagtaccccgacttt
acaggataccatcatgtgccaaacatggacacgcacgcacaatccggggctagttgggga
ccctcatatggcgccccgagagaggactggggtgctccatatagtcttggacctcctaac
aatcttcctccccccatgaacaactcatctcctggacaagttccttactgttcgtccgag
tacagtcacatgcacccccccggagctgcggtgctgcagccgccgccggacaacgttact
gttgcgcagctttctcctgagagagaaaggcgcaattcataccagtggatgagcaaaaca
gcacaagcatcttctacaggtaaaacaagaacgaaggagaaatacagggtggtgtacaca
gaccaccagaggctggagctggagaaggagtttcacttcaacagatacatcaccatcagg
aggaaatccgaactggctgtcaacctgggcctgtcggaaagacaggtgaaaatatggttt
cagaaccgcagagccaaagagaggaagctgataaagaagaaattgggtcagtccgacggc
agcagcgggtctgtgcacagcgacccgggttcggtgagccctctgccggtgccgggctcc
ctcagtcccacggagatccacggctctctgtaccctcctcagggaatgaacaccttgccg
tctatcaggaatatccagcaggtgactgtgactcagtag
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