Xiphophorus maculatus (southern platyfish): 102230567
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Entry
102230567 CDS
T02923
Name
(RefSeq) runt-related transcription factor 1-like
KO
K08367
runt-related transcription factor 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102230567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102230567
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
102230567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
102230567
NCBI-ProteinID:
XP_005807448
Ensembl:
ENSXMAG00000004396
UniProt:
M3ZQC0
LinkDB
All DBs
Position
24:complement(124697..140151)
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AA seq
484 aa
AA seq
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MVFLWDAKYDPAPGRRYTPPSTSLASGGKMAEALPLGAQEAGGGATVMGKFRIADHSMAE
VISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKLVTLGDIPDGTLVTVMAGNDENY
SAELRNATAVIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGP
REPRRHRQKLDEVKPGSLAFSERLTELEQLRRSSIRVTPPHNHHHHQQSANSHQSAVLTS
ATFSSPPHSGLTADSRQIQSSPSWSYDQSYPYLGQITTPTVHTTAPLSPGRSSLGDLSSR
LTGPDLTAFGDPRMALERPFSSLPSLPDSRFSNPRVHYPPTGAAFTYTPTHNPVSNGAIS
ITMATAMATTQTGRYHTYLPPPYPANTPHQAQNGPFQSTSSPYHLYYSATTGSYQFSMMA
GGGGGSDSHSPPRILPPCTTASTGSSLLHPSLPNQNEGVGVEVESSHSSSPTNMVAAEAV
WRPY
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctgtgggatgcaaaatacgatccagcccctggtaggcgatacactcccccc
tccacttcccttgcctcgggggggaaaatggctgaggctttgcctctaggagcccaggag
gctggtggaggggccaccgtgatgggcaagttccgcatagcggaccacagcatggctgaa
gtgatttctgatcatccaggagagctggtaaaaactgacagcccaaatttcctctgttct
gtcctgcccactcactggaggtgtaacaagactcttcccattgcttttaagttagtgacc
ctgggtgatattcctgatggtactttggtaactgtgatggctggaaacgatgagaactat
tcagcagagcttcgcaatgccaccgcggtcatcaagaatcaagtggcccgattcaatgac
ctgcgatttgtcggccgcagcgggagaggaaaaagtttcactctcacgatcacggtgttc
accaaccctccccaagtggctacatatcaaagagctatcaaaatcacagtggatggtccc
agagagccacgacgtcatcgtcagaagctggacgaggtcaaacctggctcattggctttc
tctgagaggcttacagagctggaacagctgagaaggagctctatcagagtaacacctcct
cataatcatcatcatcatcagcaatctgcaaatagccaccaatctgcagtcctcacttca
gcaacattttctagccctccacactctggactaacagctgattccagacagatacagtct
tctccatcctggtcctatgatcagtcttatccctaccttggccagataactactcccact
gttcacacaactgctccactttcacctggtcgctcttctcttggtgacctgtcctcaaga
ctcacaggtcctgaccttacagcctttggtgaccccaggatggctttggagcggcctttt
agctcccttccctccctgcccgactctcgtttctctaaccctcgggtgcactatcctcct
acaggagctgcattcacatacacgccaacccataatccagtctctaatggtgccatcagc
atcactatggcgacagccatggcaaccacccaaacaggacggtaccatacatatttgcct
ccaccgtatcctgcaaacacccctcaccaagctcagaatgggccgttccagtctacttca
tctccataccacctgtactactcagccaccaccggctcataccagttctctatgatggct
gggggaggaggcggcagtgactcacattctccacctcgtatcctccccccttgtaccact
gcatccacaggttcttctcttctacacccttctttgcctaatcagaatgagggagtgggt
gtggaggtggaatccagccacagtagctcaccaacaaacatggttgctgctgaagctgta
tggagaccatattga
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integrated database retrieval system
