Xiphophorus maculatus (southern platyfish): 102232073
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Entry
102232073 CDS
T02923
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04141
Protein processing in endoplasmic reticulum
xma04210
Apoptosis
xma04217
Necroptosis
xma04218
Cellular senescence
xma04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102232073
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102232073
04217 Necroptosis
102232073
04218 Cellular senescence
102232073
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102232073
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102232073
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
102232073
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C2: calpain family
102232073
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
102232073
NCBI-ProteinID:
XP_023190114
Ensembl:
ENSXMAG00000008745
UniProt:
M4A2U1
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Position
5:207359..224894
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AA seq
702 aa
AA seq
DB search
MFSSVSGRIQHERDRAEGLGSVQQAVQYQNQDFWALREECLQNGTVFLDPLFPAEPGSLG
FKELGPISAKTRGVEWRRPTELSAEPRFIVGGATRTDICQGALGDCWLLAAIGSLTLNQQ
LLHRVVPHGQDFSHLYAGIFHFQFWQFGKWVDVVIDDRLPVKDGELLFVHSAEGSEFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELKKAPRDLYRIIGKALERGSLLG
CSIDITSAFDMEAVTFKKLVKGHAYSVTGVRQLEYRGRQERLIRIRNPWGQVEWTGAWSD
SSSEWNAIDSAEKDEMLCKMEDGEFWMSFQEFLHQFSRLEICNLTPDALSQDATSFWTTV
TYEGSWRKGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDQAACSFLVALMQKDRRQF
RRHGEDMHTIGFAIYEIPKEFRGSAGVHMKKDFFLRRSSCARSESFINLREVSSRFRLPP
GEYLIVPSTFEPSKEADFVLRVFTEKQSETEDMDDVLVANLDEEEEISEGDIDDSFRSLF
AQLSGDDMEISVRELRTVLNRVVSKHRDLQTDGFSMESCRAMVSLMDKDGSARLGLLEFQ
ILWNKIRKWLGIFREFDLDKSGCMNSYEMRLALENGGFKLNNKLYQMLIARYADNEIIDF
DNFTCCLVKLETMFRIFQGLDRDGTGTVEMNLMEWLFVTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcagcgtgtcgggtcgaatccaacacgagcgggaccgggccgagggcctgggc
tcggtccagcaggcggtccagtaccagaaccaggacttctgggccctgagggaggagtgc
ctgcagaacggaaccgtcttcctggacccgctcttcccggcagaacccggctctctgggc
ttcaaggagctgggcccaataagcgccaagacccggggcgtggagtggcgccggcccacg
gagctgtcggcggagccgcggttcattgtgggcggagccaccaggaccgacatctgccag
ggggcgctgggcgactgctggctgctggctgctatcggatctctgactctcaaccagcag
ctgcttcatcgggtggttcctcatggccaggacttcagccacctgtacgccggcatcttc
cacttccagttctggcagtttggcaagtgggtggacgtggtgattgacgaccggctgccg
gttaaagatggagagctgctgttcgtccattcagctgagggaagcgagttctggagcgcc
ctgctggaaaaggcctacgccaagctgaatggctcgtatgaggccttgtccggcggcagc
accactgaaggttttgaggactttactggaggcgtggcggagatgtatgagctgaaaaaa
gctcccagagatctctaccggatcatcggcaaagctctggagagaggatcgctgctggga
tgctccatagacatcaccagtgcctttgacatggaggccgttaccttcaagaagctggtg
aaaggccacgcctactcagtgactggtgtcagacagctggagtaccgcgggcggcaggag
cgtctgatccggatcaggaacccctggggtcaggtggagtggaccggcgcctggagcgac
agctcctcagagtggaacgccattgattctgcagaaaaggatgagatgctgtgtaagatg
gaggatggagagttctggatgtccttccaggagtttctgcatcagttctcacgtctggag
atttgcaacctgactccagatgcactgagtcaggatgccaccagcttctggaccaccgtg
acgtacgagggcagctggaggaaaggaagcacagctggaggctgcaggaaccaccccaac
accttctggatcaaccctcagtacaagatcactcttctagaggaggacgatgaccctgag
gatgaccaggccgcctgcagcttcctggtggctctgatgcagaaggaccgccgccagttc
cgccgccacggcgaggacatgcacaccatcggcttcgccatctatgagattcccaaggag
ttccgaggttctgcaggtgtccacatgaagaaggacttcttcctgcgccgctcctcctgc
gctcgctctgaaagcttcatcaacctgcgggaggtgagctccaggttccgcctcccgccc
ggagagtacctgatcgtcccgtctacgtttgagccctcgaaggaggcagactttgtcctc
agggttttcactgagaaacagtcggagaccgaggacatggacgatgtgttggtggccaac
ctggatgaggaggaggaaatctctgagggtgacattgacgactcctttaggtccttgttt
gctcagctgtccggagacgacatggagatctcagtgcgggagctcagaaccgtcctcaac
agggtcgtctccaaacacagagacctgcagacggatggattcagcatggagtcctgccgg
gccatggtcagccttatggacaaagacggcagcgctcggctcggtctgctggagtttcag
atcctttggaacaagattaggaagtggctggggatcttcagagagtttgatctggataag
tctggctgcatgaactcttatgagatgcgtctggcgctggaaaacggcgggttcaaactg
aacaacaagctgtatcagatgttgatcgctcgatacgccgacaatgaaatcatcgacttc
gacaacttcacctgctgcctggtcaaactggagaccatgttcagaatcttccagggcctg
gacagagacgggactggaactgtggagatgaacctcatggagtggctctttgtgaccatg
tgtggctga
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