Xiphophorus maculatus (southern platyfish): 102233937
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Entry
102233937 CDS
T02923
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03060
Protein export
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
102233937 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xma02044
]
102233937 (srp54)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
102233937 (srp54)
Secretion system [BR:
xma02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
102233937 (srp54)
Eukaryotic Sec-SRP protein
102233937 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_33
DUF2209
NPHP3_N
AAA_17
ResIII
SRPRB
MeaB
AAA_22
nSTAND_NTPase5
APS_kinase
MobB
AAA_30
AAA_19
Zeta_toxin
AAA
PduV-EutP
nSTAND_NTPase7
6PF2K
ATP_bind_1
Thymidylate_kin
AAA_16
AAA_18
Torsin
Motif
Other DBs
NCBI-GeneID:
102233937
NCBI-ProteinID:
XP_023208889
Ensembl:
ENSXMAG00000018315
LinkDB
All DBs
Position
19:20353840..20373199
Genome browser
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
GENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggccgacctgggaaggaagatcacctcggcgctgaggtcactcagcaacgcc
accatcatcaatgaagaggtgttgaacgccatgttgaaggaggtgtgtgctgctctcctg
gaggcagacgttaacatcaaactggtcaaacaactgagggaaaacgtcaagtccgccata
gacctggaggagatggcctcaggcctgaacaagaggaggatgatccaacacgctgtgttc
aaggagctggtgaagctggtcgatcccggcgtgaaggcctggactccgactaaaggcaag
aacaacgtcatcatgtttgttggtctgcaaggcagtggcaaaactacaacctgctccaag
ctcgcttattattaccagagaaaaggctggaagacctgcctgatctgcgccgacaccttc
agagcaggtgccttcgatcagctcaaacaaaacgccaccaaagccagaatacctttttat
ggcagttacactgagatggatcctgtggtgatcgccgcagaaggcgtcgagaaattcaaa
ggcgaaaactttgagatcatcatcgtggacacaagtggaagacacaaacaggaggattca
ctgtttgaggagatgctgcaagtctccaacgcagtgcaacctgataacattgtgtacgtg
atggatgcttccatcggtcaggcctgcgaagcccaggctaaagctttcaaagacaaagtg
gacgtagcgtcggtcatcgtcacaaagctagatggacacgccaaaggaggcggagctttg
agcgctgtggcggccaccaggagtcccatcatcttcatcggaacaggggaacacatcgac
gacttcgagccgtttaagactcagcctttcatcagcaaactgctgggaatgggtgatatt
gaaggactgatcgacagagtgaacgagctaaagctggatgacaacgaggagctgatagac
aaactgaaacatggtcagttcacgctcagggacatgtacgagcagttccagaacatcatg
aagatggggcccttcggacaaattatgggtatgattcccggttttggtacagatttcatg
agtaaaggaaacgaacaggaatcaatggccagattgaagaaactcatgaccatcatggac
agcatgaatgaccaggaactggacagtaaagatggggcgaagctgttcagtaagcagccc
aaccggatccagagagtggcccgtggatctggagttgccaccagagacgttcaggagtta
ctcactcagtacactaagtttgctcagatggtgaagaagatgggaggcatcaaaggacta
ttcaaaggaggagacatgtccaaaaacgtgaacccatctcagatggccaaactgaaccag
cagatggccaaaatgatggaccctcgggtcctgcatcatatggggggcatggctggcctt
cagtccatgatgcgccagttccagcaaggagcagccggcaacatgaaaggcatgatggga
tttaacaacatgtga
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