Xiphophorus maculatus (southern platyfish): 102235226
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Entry
102235226 CDS
T02923
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102235226 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102235226 (gabra5)
Ion channels [BR:
xma04040
]
Ligand-gated channels
GABA-A
102235226 (gabra5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102235226
NCBI-ProteinID:
XP_005804486
Ensembl:
ENSXMAG00000016186
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Position
9:complement(24834186..24866937)
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AA seq
459 aa
AA seq
DB search
MADGMCSSVAMRRLCFCVLLVSITCRLSLSQDLAGTPKQAEINDNITIFTRILDGLLDGY
DNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLAL
NNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPVSEVIYKWTEDAAKSVVVAEEGSRLNQYHLIGQTAGTEEIYTS
RGEYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQ
QPKKKDPLALSMKPNNTCSAGVNYTANLTKDASISTISNSTTIQLKPSESKAPDPKKTYN
SVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgggatgtgctccagcgttgcaatgagacgtctatgcttctgtgtcttgctt
gtgagcatcacctgccgtctgagcctctcccaggatttagccggaacccccaaacaggcg
gagataaatgacaacatcaccatcttcacccgcatcctggacggactgctggacggttac
gacaacagactccggcccggtctgggagagaaggtgacagagatcaagaccaacatcttt
gtcacaagcttcggtccggtctctgatacggaaatggaatacaccatcgacgtattcttc
cgtcaaagctggaaagacgaaaggctttgcttcaaaggcccgatggagatgctggccctg
aataacctgctggccagcaacatctggacccccgacacgttcttcctcaacgggaaaaag
tccattgcgcacaacatgaccacgcccaacaagctgctgcggctgaaagacgacgggacg
ctcctctacaccatgaggctcaccatctcagcagaatgccccatgcagctggaagatttc
cccatggatgcccacgcctgtccccttaagttcggaagctatgcctaccctgtctcagaa
gtgatctacaagtggactgaggacgcagccaagtctgtggtggtggcagaggaaggctcg
aggctcaaccagtatcacctgatcggccagacggcgggaacggaggagatctacaccagt
cggggcgagtacacagtgatgatggctcacttttacctgaagaggaagataggctacttc
gtcatccagacctacatgccgtgcttcatgactgtgatcctgtcccaggtttctttctgg
ctcaaccgagagtcggtgccagcaagaaccgtctttggtgtgaccacggtcctcaccatg
accactctcagcatcagcgctcgaaactccctacccaaagtggcctatgccaccgccatg
gactggttcattgcggtgtgctatgcctttgtcttctcagccctcattgaatttgccaca
gtgaattattttaccaaaaggagctgggcctgggacgggaaaaaagcgatggaggcccaa
cagcccaagaaaaaagacccattggcgttgtccatgaagcccaacaacacttgctccgcc
ggtgtgaactacacagccaacctcaccaaggacgcgtccatctctaccatttcaaacagc
acaactattcagctcaaaccgtctgaaagcaaggccccggaccccaaaaagacttacaac
agcgtgagcaagatcgacaagatgtccaggattgtgttccctgtgctttttgggaccttc
aacctggtgtactgggccacgtacctcaacagggagccggtgattaaaggagccgagtga
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