Xiphophorus maculatus (southern platyfish): 102238034
Help
Entry
102238034 CDS
T02923
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102238034 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102238034 (xpc)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102238034 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
AP3D1
Motif
Other DBs
NCBI-GeneID:
102238034
NCBI-ProteinID:
XP_005800235
Ensembl:
ENSXMAG00000019360
UniProt:
M4AY62
LinkDB
All DBs
Position
1:9022289..9033641
Genome browser
AA seq
934 aa
AA seq
DB search
MAKRRKCAETEADTKKPKQVLNAEGRGAKTRSRKKAPENDPAEKEERLERKVNPKPRLSS
KRAAQNKSSSTTIISADSKTSKYFQSLPKEEVNSEDDFEMPTAAPAAVKKSTKKPEEEEE
KEEEEEDDSEDEDDWEEVEELAEPLGPAETPEPVLSPQPVEIEIETAEVRKQKKRQAEFE
TYLRRMMKRYKKDLLIDTHKVHLLCLLANGMFRNRLCSEPDLLAVALSLLPPHFCTVARE
HIDQNYLSGLLKWFRATFTLDPSLPTEERPDPQALLQRRLGSLSARDHQEMTHLFLLFLR
SLQLFCRLVLSLHPVLFKPPSSKSKGAKTSTGAAERCQTSQESSKSNSPETKVSPGTKRR
AQGEKVKGSSRGKKAKRKEMKEEEEEKPVLSGGQRPKNSKRRSVASKVNYKEESNSEADE
EEKEEASDAEEYQESSEDDFETSTKPARKRTGLGKSSEKTSSTQGALKRRRTGGKQQEKN
EDGEWEEGKEEEDDEDEGTTSNRAKGRSRQRKDGPGADEWIEVYLDKSSSWVCVDVEHGV
GVPHLCSQNATAPLTYVVAVDGDGFLKDLGRKYDPTWMTASRKRRVDDEWWEDTLEPFMG
PEDERDKREEKELQSKLLNKPMPTSIAEYKSHPLYALKRHLLKYEALYPPTAAVLGYCRG
EPVYSRDCVRTLHSRETWLKEARTVRLGEEPYKMVKGFSNRSRKARMMSEMKDENDLPLF
GEWQTEEYQPPIAVDGKVPRNDYGNVYLFKACMIPVGCVHLRLPNLHRVARKLDLDAAPA
VTGFDYHGGYSHAVTDGYIVCEENEEVLRAAWVEEQEIQKQKEKEKKEKRAIASWTLLVK
GLLIRERLKQRYSQKSPGLGSLTPGEEAGGFSSDEDGVEVDLPGAKTASETLALSWPQNR
QAEEDADPGKQKKKKTTKREKKGQEKHLFPFEKV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggaggaagtgtgcagagaccgaggccgatacaaagaagccgaagcaggtg
ctgaacgcagaaggcaggggagcaaagacgaggagcaggaagaaagctccagaaaacgat
cccgcagaaaaagaggagcggctcgagaggaaggtcaaccccaaaccacgtttgtcttca
aaacgtgcagcacagaataaatcctcttcaaccaccatcatcagtgctgacagtaaaaca
agtaagtacttccagtctctgcccaaggaggaggtcaacagtgaagacgactttgagatg
ccgaccgctgcaccagccgcagttaagaagagcaccaaaaaaccagaggaggaagaagaa
aaagaggaggaggaagaggatgatagcgaggatgaggatgactgggaggaagtggaagag
ctggccgagccgctgggtccggctgaaacaccagaacccgtcctgtcgcctcagcctgta
gagatcgagattgagaccgcagaagtcagaaagcagaagaagaggcaggcggagtttgag
acgtacctcaggcgaatgatgaagcggtacaagaaggacctgctgatagacacacacaag
gtccacctgctgtgccttctagctaacgggatgttccgcaacaggctgtgcagcgaaccg
gacctgctggcggtcgctctgtctctgctgcccccgcacttctgcacggtggccagggaa
cacattgaccagaactacctctctggactcctcaagtggtttagagcgaccttcaccctc
gaccccagtcttcccactgaggagcgtccggacccacaggctctcctgcagagacgactg
ggaagcctctcagccagggaccaccaggagatgactcatctttttctgttgttcctgagg
tctctgcagctcttctgccgactggttctctctctgcacccagttcttttcaagcctccg
tcctcaaagtccaaaggggctaaaacatcaactggcgctgcagaacgttgccagacaagc
caggaaagctccaagagcaactctcctgagacaaaagtttctccaggcaccaagagacga
gctcaaggtgagaaagtcaaagggagcagcagaggcaagaaagcaaagaggaaagaaatg
aaggaggaagaagaggagaagcccgtgttatctggaggccagagaccaaaaaactccaaa
cgccgcagcgtcgcctcaaaggtcaactacaaagaagagagcaacagtgaggcagacgag
gaagaaaaagaggaagctagtgatgccgaggaatatcaggaatccagcgaggacgatttt
gaaaccagcaccaaacctgcaagaaagaggacggggctcggaaagagctctgagaagacc
tcaagtacccaaggcgccctaaagagaagaagaaccggtgggaaacagcaggagaaaaac
gaggacggtgagtgggaggagggtaaagaagaagaggatgatgaagacgaaggcacgacg
agcaacagagcgaagggacggagcaggcagaggaaagacggacccggagcggacgagtgg
atagaggtctacctagacaaatcgtcttcgtgggtgtgcgtggacgtggagcatggagtc
ggagttccccacctctgctcacagaacgccaccgcgccgctgacctacgtggtggcggtg
gacggagacggcttcctgaaggacctgggaaggaagtacgaccctacctggatgacggcg
tcccggaagaggcgggtggacgacgagtggtgggaggataccctggagccattcatgggc
ccagaggatgagagggacaaaagggaggagaaagagctccagagcaagctgctgaacaaa
cctatgccaacctccatagcggagtataaaagccatcctctgtacgccttaaagagacac
ctgctgaagtacgaagccctctatcctccaacagccgctgtgctcggatactgcagagga
gaaccagtgtactccagggattgtgtgcgcaccctccactccagagaaacctggctgaag
gaagctagaactgttcgacttggagaggagccgtacaagatggtgaaaggcttctccaac
cgctccagaaaggccaggatgatgtccgagatgaaggacgagaatgatcttcctctgttt
ggagaatggcagactgaagaataccagccacccatagctgtggatgggaaggtcccccgt
aatgattacggtaacgtctacctgtttaaagcctgtatgatcccggtgggctgcgttcac
ctgaggctgcccaacctgcaccgcgtggctaggaagctggacctggatgctgcgcctgca
gtcacaggattcgactaccacggaggatactcccacgctgtgactgatggttacatcgtg
tgtgaagagaacgaggaggtcctccgagctgcctgggtggaagagcaggagattcagaag
cagaaagaaaaagagaaaaaagagaagagagcgatcgccagctggactctgctggtgaag
ggactcctgatcagagagaggctgaagcagcgttacagccagaagagcccgggcctgggg
agcctcactcctggagaggaagctggaggtttctcctccgatgaggacggggtcgaagtt
gatcttcccggagccaaaacggcatctgagactctggcgctgtcctggccccaaaacaga
caagcagaggaggacgcagatccaggcaaacagaagaagaagaagacgacaaagcgagag
aagaagggtcaagagaaacatttatttccttttgagaaagtttaa
DBGET
integrated database retrieval system
