Xiphophorus maculatus (southern platyfish): 111609763
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Entry
111609763 CDS
T02923
Name
(RefSeq) laminin subunit alpha-3-like
KO
K06240
laminin, alpha 3/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04382
Cornified envelope formation
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111609763
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111609763
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111609763
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_II
EGF_laminin
Laminin_G_3
EGF_LMN_ATRN
Laminin_I
PDDEXK_19
DUF5886
Motif
Other DBs
NCBI-GeneID:
111609763
NCBI-ProteinID:
XP_023195856
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All DBs
Position
9:22386698..22409003
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AA seq
1660 aa
AA seq
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MKQKAPLLWLAVWLFFSFAPICLSAQSNSKGWHDRDAQRLGNKSGTKKFCDPSVSDQRAG
AVPECTPGFYREPTGPSKGRCVPCRCNGLSDLCDAQTGNCMNCRFNAAGDRCERCREGFY
GHAANRTCRACPCPSTHNNFAVACLDISPGVVECLCKRGYSGARCERCASGYYGSPMVHG
DICKPCSCTDSSLSVCDSLTGECATGADSSGGDPWHKCDACARALLVDLQKEDGGLALLR
QLVPNITDGLRRLSLLEADTSQTKLRVDGCSGAVRWLEPNVEQLEADIVLVGNDLTYQNN
EMPDIILDLEKALKNVNRTIIQVQDLLFKAVALIQAANGLAEQQTSPKPDVSSSLSDGQK
SQMMEDAEQIMAEIKDRRCTIQGAGADGEQEGAHMLLENIRADTSDLSQTVQDVLKRTAD
VLMASNVSVTAVAEQLLSVQETVEKTQRLNLKGASGLENLQTALAELRRERTTAPPAMER
LYDTMKKTKDALLMSQKIKNEEESLAAQVDGGKMELFAKLNATRKCVTQTDAVTRAEEHA
EELRAAASQLQQVLQNVAKSRELLRIFGAHDSVARLSQAANQALRDVKEGGLLISAEEME
DVSADLHAEADDTRRRLKTVSRALNAQRDSVKKQEKKAEVLKASVLDVGGSIKQIERDDT
NGLLEFVKITTSAVNAKVSKVKERLGNISLEVRRIPSDSFSGNFLTDANRAVKRLNGALP
GLEDKLEQIKALGENTSPSANVTESIQRIKDIIDETRSFVNRLSLATTFNGKSHIELHPP
RNLEDIKAFTAVDLLLNLHHGEPTAVRRRRRRQHKHRDENSHFVLYLGNRDTFGDYFAMV
IRNTTLICLYKLGGVVHEIETSQISTGKINSSYFDRIVFQRVYQDATVGITKNVTSQKPV
SLPPKQNLPNTTSSMMSLDSQRAVFYVGGHPEEFDPPEELRYPKLRGAMKLSYINDIPVN
LFNYRRAVNMQTKQSTAKIPQTELCDYYDGTGYRMAFLKEPQKKKRRLFRFNTSSRETNA
LLFCIGNEESFFCVCVERGFLVLEGQQGGRQLRNQSSAQVSLFEQTFAVMIADRFVVRYG
SEQIHTDHFQTNYTWWYMGGLPAWLRRRHNITAAPLRGCVDHVTADAEFVEYNKTVGVGC
GCPVSLLGVRAATVYSALPADSLFVCSGRSRVSLGFSSTSRHAVLLNCGSQSFTSGRDLQ
LSLADGFIIFRGYNYTLTSGKRYNDGAWHYLSAEGRPTGLGLTIDNVNVIQKQAPPITRQ
EEKFKGCVANLYTRRNDSKFIPADLSSLSHAEDVFPGWCSLKFQSLAGAHCRRQQAQYEH
QFSEASWLSYTFPEEELNYRPHFSLHIKTNSSKGLILHVAGRGVVPRLALYMANGKIRLS
LGQNRVIQHKKKSNDGGWHMVEFSVENSTFHLLVDGVRVPDGQLPGNEGSSLRLRNPVYL
GGHPKKKTTKGHDIPADSVIGCLRDFKMNNVAAPAPDSSREILPCLGGLTETGTFFGGGH
VLLDNFFTDGSQFVLSFEMRPQHRTGLLFHFRSDSTSSLNVYLMENGVGVGLNDATGPVS
VTVAPRESLCDGKFHAVTVSKQRSVIELVVDSESKQKTHSSTSGPYATLYIGGTTHRHGV
PVSSPFVGCLRLLKVNGKPLGLETESEVVGVVSMNRCPAD
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaaagcgcctttgctttggcttgcagtgtggttgtttttctcttttgctcca
atttgcctttctgctcagagcaattcaaaaggctggcacgacagagacgctcagaggctt
gggaataaaagtggcacgaaaaagttctgtgatccctccgtcagcgaccagagagcaggt
gctgtccccgagtgcacccctggcttctacagagaaccgacaggaccaagtaagggacgg
tgtgtgccgtgccgctgcaacggactctctgatttgtgtgatgcacaaacagggaactgc
atgaactgccggtttaacgccgcgggggatcgatgtgagcggtgcagggagggcttctac
ggacacgcagccaacaggacctgccgagcctgtccctgtccctccacacacaacaatttt
gcagtagcctgcctcgacatcagcccaggagttgttgaatgtttgtgtaaaagaggctac
agtggagctcgctgcgagcggtgtgcatctggctactatggtagtcccatggtgcatgga
gacatctgcaaaccctgcagctgcacagacagcagcttgagcgtctgtgactctctgact
ggagagtgcgccactggggctgacagcagcggtggtgatccctggcacaaatgtgacgcc
tgtgctcgcgctctgctggtggacttgcagaaagaggacggcggactggctctgctccgt
cagctggtgccgaacattaccgatggcctccgccggctgagcctactggaggctgacacc
tcgcaaacgaagcttcgggtcgatggatgcagcggtgctgtgaggtggctggaaccaaac
gtggagcagctcgaggcagacatcgttctggtcggaaatgacctgacttaccaaaataac
gagatgcctgacataatcttggatcttgagaaggccttaaagaacgtcaacagaaccata
atccaggtgcaagaccttctcttcaaggcagtggctctcatccaagcagcaaatggtttg
gcagagcagcaaacttcaccgaaacctgacgtctctagttctctttctgacggtcagaaa
agtcagatgatggaggacgctgagcaaatcatggcggaaattaaagacagacggtgcacc
attcagggggctggagcagacggcgagcaggagggggcccacatgttgctggagaacatc
agagccgacacgagcgacctctcacaaaccgtccaggatgttctgaagcggactgcagac
gtactgatggcctcaaacgtttctgtgacagcagtggcagagcagctgttatctgttcag
gagacggttgagaaaacacagaggcttaaccttaaaggcgcctccggtctcgaaaatctg
cagactgctctggctgagctgcggagagaacgaaccacggcgcctcctgcgatggaacgg
ctttacgatacgatgaagaaaactaaagacgcccttttaatgtctcagaaaattaaaaat
gaagaggagagtcttgctgctcaggtagacggaggtaaaatggagctttttgcaaagcta
aatgcgacccggaagtgtgtgacccagacggacgccgtgacccgggctgaggagcacgct
gaggagctgagagctgcagcatctcagttacagcaagtgcttcaaaatgtggccaagagc
agagagctgctcaggatttttggagctcacgacagcgtcgcccggctctcgcaggcggca
aatcaggctttaagggacgtgaaggagggaggtctgctcatcagcgctgaggagatggag
gacgtttcagctgatttacacgcagaagccgacgacactcggcggcgcctcaaaacggtt
tcacgtgcgctgaacgctcagagggacagcgtgaaaaagcaggagaaaaaggcagaagtg
ttgaaagcgagcgtcttagacgttggtggcagcatcaaacagattgaaagagatgatacc
aatggccttctagagtttgtgaaaataacaacctctgctgtaaacgctaaagtcagcaaa
gtaaaggagcgcctcggtaacatcagcctcgaagtgaggcgaatcccctcagatagcttt
agtggaaactttctgactgatgcaaaccgggctgtgaaaaggttgaacggagcactgcct
ggtttggaagacaagcttgaacaaattaaggctctgggtgaaaacacgtctccgtctgcc
aacgtaacagagagcatacagaggatcaaggacatcatagatgagacaagaagctttgtt
aacaggctgtctcttgccaccacctttaatggaaagagccacattgagctccaccctccg
agaaacctggaggacataaaagcatttacagccgttgatctgctgctcaatctccaccac
ggagagccgaccgcagtaaggcggcgaaggcggcggcagcacaaacacagagatgaaaac
agccactttgttctctatctgggtaacagagatacctttggagactactttgcgatggtc
atcagaaacacaacgttgatttgtctttataagttgggcggagttgttcatgagatagaa
accagtcaaatatcaacgggcaaaataaactcctcttattttgacaggatcgtcttccaa
agagtttaccaagatgctacagttggcatcacaaaaaacgtcacatcacagaaacccgtc
agcctccctcccaaacagaatctacccaacacgacgagcagcatgatgagccttgactcg
cagcgtgccgttttctacgtgggaggccatcccgaggagttcgaccctccagaggagctg
cggtaccctaagctcagaggagcgatgaaactttcctacatcaacgacattcctgtcaac
ctcttcaactacagacgtgctgtcaacatgcagacaaagcagagcactgcaaaaatccct
cagacagagttatgtgattattatgacgggacaggttaccgcatggccttcttaaaggag
ccgcagaagaagaaacgacggctgttcagattcaacacgagcagccgagagacaaacgcc
cttttattctgcatcggaaatgaagagtcctttttctgtgtctgtgtagaaagaggcttc
ctggtgcttgaaggtcaacaaggcggccggcagctcagaaaccagagttcagctcaagtt
tctctgtttgagcagacgtttgcggtcatgattgccgacagatttgtcgtgcgctacgga
tcagagcagatccacacagatcattttcagactaattacacgtggtggtacatgggaggc
ttgccagcctggctcagacggagacacaacatcacagcagccccactgagaggatgtgtg
gatcacgtgacggcagacgcagagttcgtcgagtacaacaagacagttggtgtcggttgt
ggatgcccggtttccttactgggcgttcgtgcggccacagtgtattcggctcttcctgcc
gattccttgtttgtctgcagcggacggtccagagtgtctctgggcttcagcagcacatcc
aggcatgctgttctgcttaattgcggctcacagagcttcacctccggtcgtgacctccag
ctctccctcgctgatggctttataatattcagggggtataattacaccttaacatctggg
aaaaggtacaatgatggagcctggcattacctttctgcagaggggaggccaacagggctg
ggtctcaccattgataatgtgaatgtgattcagaaacaagcgcctcctatcacacggcaa
gaagagaaatttaaaggctgtgttgctaacctttatacaagaaggaatgactctaaattt
atccccgctgatctcagttcactgtcgcacgcagaagacgttttccctggttggtgcagt
ttaaagtttcagagtttggctggcgcccactgcagacgtcaacaagctcagtatgaacac
cagttctctgaagctagctggctcagctacacattccctgaagaagaacttaactacagg
cctcacttctctcttcacataaaaactaattcatctaaagggctgatccttcatgtagca
ggaagaggggtcgtcccccgcctggctctctacatggctaacggaaagatcaggctgtcg
ctcggacaaaacagagtcatccagcacaagaagaagagcaacgacgggggctggcacatg
gttgagttcagcgtggagaacagcacttttcacctgctggtcgacggagtgcgcgtcccc
gacggacagctgcccggcaacgagggatcgtccttacggctgcgcaaccctgtgtacctg
ggagggcatccgaaaaagaagacaactaaaggacacgacattcccgcagacagcgtcatc
ggctgtttacgggatttcaaaatgaataacgttgctgctcccgcgcctgattccagccgt
gaaatcctgccctgcctgggcggcctcacagaaacggggaccttctttggcggcggtcac
gtcctcctagataacttcttcactgatggttctcagtttgtgctgtcctttgagatgcgc
cctcagcaccgtacaggtctcctcttccattttcgaagcgacagcacaagcagccttaat
gtgtacttaatggaaaatggggtgggtgttgggctgaatgacgctacaggtcccgtcagt
gtgacggtggcgcctcgtgaaagcctctgtgacggaaagtttcatgcggttacagtgtcc
aaacagcggtctgtcatcgaactagtggtggactccgagtccaagcagaaaacgcactct
tccacgtccggcccgtacgcaacgctctacatcggaggcacaacacatcgacacggcgtc
ccggtgtcgtccccgtttgtgggctgcttgcgactcctgaaagtcaacgggaagcctctt
ggacttgagactgaatctgaggtggttggggttgtgagcatgaacagatgcccagcagac
tga
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