Xanthomonas medicagonis: AB3X07_17765
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Entry
AB3X07_17765 CDS
T10867
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB3X07_17765 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xmd03021
]
AB3X07_17765 (rpoA)
03400 DNA repair and recombination proteins [BR:
xmd03400
]
AB3X07_17765 (rpoA)
Enzymes [BR:
xmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3X07_17765 (rpoA)
Transcription machinery [BR:
xmd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3X07_17765 (rpoA)
DNA repair and recombination proteins [BR:
xmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3X07_17765 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XEB08644
LinkDB
All DBs
Position
complement(4224115..4225113)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHTGDSATLSLSKQGPGVVTAADIKVDHN
VEILNNDHVICHLTKDTAINMRLKIERGFGYQPAAARRRPDEETRTIGRLVLDASFSPVR
RVAYAVESARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPASNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtgggccgcagatcgaacgccttacc
gataaccgcgccaaggtcgtgatcgagcccttggagcgtggttatgggcatacgctgggc
aatgccctgcgtcgcgtgctgctgtcctcgattcccggcttcgcgatcaccgaagtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaaggcctgcaggaagacgtgctggaa
gtcctgctcaacctcaaggacgtggccatccgcatgcacaccggcgacagcgccacgctg
tcgctgtccaagcagggtccgggcgtcgtgaccgctgccgatatcaaggtcgaccacaac
gtcgagatcctcaacaacgaccatgtcatctgccacctgaccaaggatacggcgatcaac
atgcgtctgaagatcgagcgcggcttcggctaccagccggccgccgcgcgtcgccgtccg
gacgaagagacccgcaccatcggccgtctggtcctggacgcctcgttctcgccggtccgc
cgcgtcgcctatgcggtcgagtcggcccgcgtcgagcagcgcaccgatctggacaagctg
gtcctggatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctgtcggtgttcggcgacttcacccatcgcgaccgtggcgcg
gccaagccggccagcaacggcgtggatccggtgctgctgcgtccgatcgacgatctggag
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtggaactgctcaagaccccgaacctgggcaagaagtcgctcacc
gagatcaaggaagtgctggcccagcgtggcctgtcgctcggcatgaagctggagaactgg
ccgccggccggcgtcgcccagcacggcatgctcggctga
DBGET
integrated database retrieval system
