Xanthomonas medicagonis: AB3X07_19185
Help
Entry
AB3X07_19185 CDS
T10867
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00040
Pentose and glucuronate interconversions
xmd01100
Metabolic pathways
xmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AB3X07_19185
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3X07_19185
Enzymes [BR:
xmd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AB3X07_19185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
XEB11900
LinkDB
All DBs
Position
complement(4546645..4547763)
Genome browser
AA seq
372 aa
AA seq
DB search
MRTGALALAFCLAGVAGSAQADASLDVATTGWATQNGGTKGGSKAAAANVYSVSNAAQLK
AALKASVGSNGRIIKVNGIIDISEGTPYSTTADMKSRARLDIPTKTTLIGVGSNAEIREG
YFYVKANDVIVRNLTIENPWDPQPVWDPDDGSAGNWNSEYDGMTIEGASNVWVDHVTFTD
GRRTDDQNGTANGRPKQHHDGALDIKKGANYVTVSYSAFKSHEKNNLIGSSDSASSTDSG
KLKVTIHNTLFENISARAPRVRYGQVHLYNNYHVGSTSNAVYPFSYAHGVGKESKIFSEN
NVFDIGGVSSCDKIAADYGGSVYRDFGSLLNGKALTCSWNNSIGWTPPYTYSLLPANKVA
ADVKAKAGAGKL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccggcgcacttgcgcttgccttctgcctggcgggagtggccggcagcgcgcag
gccgatgccagcctggacgtcgccacgaccggctgggcgacccagaatggcggcaccaag
ggcggctccaaggccgccgccgcgaacgtctacagcgtgagcaacgccgcgcagctgaaa
gccgcattgaaggccagcgtcggcagcaacggccgcatcatcaaggtcaacggcatcatc
gacatcagcgaaggcacgccctacagcaccaccgcggacatgaagagccgcgcgcgcctg
gacattcccaccaagaccacgctgatcggcgtcggcagcaatgccgagatccgcgaaggc
tacttctacgtcaaggccaacgacgtgatcgtgcgcaatctcaccatcgagaatccgtgg
gatccgcaaccggtgtgggatccggacgacggcagcgccggcaactggaattccgaatac
gacggcatgaccatcgagggcgccagcaacgtgtgggtggaccacgtgaccttcaccgac
ggccgccgcaccgacgaccagaacggcaccgccaacggtcgccccaagcagcatcacgac
ggcgcgttggacatcaagaagggcgccaactacgtcaccgtgtcctactcggcgttcaag
tcgcacgagaagaacaacctgatcggctccagcgacagcgcctccagcaccgacagcggc
aagctcaaggtgaccatccacaacaccctgttcgagaacatctccgcgcgcgcgccgcgg
gtgcgctacggccaggtgcacctgtacaacaactaccacgtcggcagcaccagcaacgcg
gtatatccgttctcctacgcgcacggcgtcggcaaggagtcgaagatcttctccgagaac
aacgtcttcgacatcggcggcgtgagcagttgcgacaagatcgcggccgactacggcggc
agcgtctaccgcgacttcggctcgctgctcaacggcaaggcgctgacctgttcctggaac
aacagcatcggctggacgccgccgtatacctattcgctgctgccggcgaacaaggtggcg
gcggacgtcaaggccaaggccggcgccggcaagctctga
DBGET
integrated database retrieval system
