Xenorhabdus nematophila ATCC 19061: XNC1_0623
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Entry
XNC1_0623 CDS
T01274
Symbol
purD
Name
(GenBank) phosphoribosylglycinamide synthetase (GAR synthetase)
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00230
Purine metabolism
xne01100
Metabolic pathways
xne01110
Biosynthesis of secondary metabolites
Module
xne_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
XNC1_0623 (purD)
Enzymes [BR:
xne01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
XNC1_0623 (purD)
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Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_4
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
CBJ88697
UniProt:
D3VJE1
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All DBs
Position
complement(533093..534376)
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AA seq
427 aa
AA seq
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MNILIIGNGGREHALAWKAAQSPLASKVFVAPGNAGTALETNLENVDIAATDIEGLLAFA
QSHDIGLTIVGPEVPLVIGVVDAFQQAGLTIFGPTKAAAQLEGSKAFTKDFLARHHIPTA
TYQNFTEIDPALAYLEKTGVPIVIKADGLAAGKGVVVAMTMEEAQGAVKDMLAGNAFGDA
GHRIVIEEFLAGEEASFIVMVDGKNVVPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVT
DEIHQRVMEKIIYPTVEGMAAEGHTYTGFLYAGLMIDQQGEPKVIEFNCRFGDPETQPIM
MRLRSDLVELCLAGAKGKLGGKTSSWDSRPALGIVLAAGGYPANYAKGDVISGLAEDTNI
DEKIFHAGTAIKDETVVTAGGRVLCVTALGNNIAEAQRKAYQRAEHISWEKCFYRKDIGY
RAIARLK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacatattgattattggcaatggcgggagagagcatgcgttggcatggaaagcagca
caatcgcctctggcaagtaaggtttttgttgcaccaggtaatgcgggcactgcattggaa
acgaatttagaaaatgtagatattgccgcgacagatattgaagggttgctggcatttgcc
cagagccatgatattggtctgaccatcgtgggacctgaggtgccattggttatcggtgtg
gttgatgcttttcagcaagcgggattgactatcttcggtccgacaaaagcggcggctcaa
ttggaaggttccaaagccttcactaaggattttcttgcccgtcaccatattcctactgcg
acttatcaaaatttcaccgaaattgaccccgcactggcttatttagaaaaaacaggcgta
cctattgtcattaaagcggatggtttggctgcgggcaaaggtgttgtcgtcgcaatgacg
atggaagaagctcaaggcgctgtcaaagatatgctggcaggcaatgcttttggtgatgcc
gggcatcggattgtcattgaagaatttctggctggtgaagaagccagctttattgtcatg
gtggatggcaaaaacgtggttccgatggcaaccagtcaggatcacaaacgcgtaggtgat
ggcgataccgggccgaataccgggggcatgggagcttattctccagctccggtcgtaacg
gatgaaatccaccaacgcgtgatggaaaaaatcatttaccctactgttgaaggaatggca
gccgaaggacatacctatactggtttcctctatgcgggtctgatgattgatcaacaaggt
gaaccaaaggtcatcgaatttaactgtcgttttggtgatcctgaaacccagccgatcatg
atgcgtctgcgctctgatttagttgaactttgccttgctggggcaaaaggcaaattaggc
gggaaaacatcctcatgggactcccgcccggcattgggcattgtgttagcggctggagga
tatcccgccaactatgctaaaggtgacgttatcagcgggttagccgaagataccaatatt
gatgaaaagattttccacgctggaacagcgattaaggatgaaactgttgtcactgcgggt
gggcgtgtcttatgtgtcacggctttaggcaacaacatcgctgaagcacagagaaaagcc
taccagagagcagaacacattagctgggaaaagtgcttttaccgtaaagatattggctac
cgggccattgcccgcttgaaataa
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