Xenorhabdus nematophila ATCC 19061: XNC1_2676
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Entry
XNC1_2676 CDS
T01274
Symbol
ppk
Name
(GenBank) polyphosphate kinase, component of RNA degradosome
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00190
Oxidative phosphorylation
xne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
XNC1_2676 (ppk)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XNC1_2676 (ppk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xne03019
]
XNC1_2676 (ppk)
Enzymes [BR:
xne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
XNC1_2676 (ppk)
Messenger RNA biogenesis [BR:
xne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XNC1_2676 (ppk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Frataxin_Cyay
PgdA_N
P22_CoatProtein
Motif
Other DBs
NCBI-ProteinID:
CBJ90730
UniProt:
D3VI90
LinkDB
All DBs
Position
2633237..2635306
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AA seq
689 aa
AA seq
DB search
MSHDRLYTEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFADVKRR
ILISEEQGSATNARQLLKKIQNKVARTDQEFDYLYNELLLEMARNQIFLINERQISPNQQ
IWLRQFFRQHLRPHITPIVINSETNLVEFLKDDYTYLAVEIIRGQEIRYALLEIPSDKVP
RFVNLPPEMPKKRKSMILLDNILRYTLDEIFKGFFDYDALNVYSMKMTRDSEYDLATEME
SSLLELMSSTLKQRLTAEPVRFVYQRDMPDEMVELLRGKLGLSNDDSVIAGGRYHNFKDF
IKFPNEGNRNLLNKPMPRLRHTWFDHFRNGFDAIREKDVLLYYPYHTFEHVLELLRQASF
DPSVISIKINIYRVAKDSRIIDSVIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSAPGLKIHAKLFIISRLEGESIIRYAHIGTGNFNEKTARLYTDYSLLTAKPEVTN
EVRRVFNFIENPYRPVTFDNLMVSPQNSRAMLNQLITQEIENAKAGEAAGITLKINNLVD
KELVDRLYDASEAGVKVRILVRGMCSLVPNQSGFSENIQVTSIVDRFLEHDRVYVFTNKG
HEKVFLSSADWMTRNIDYRIEVAVCLLDSMLKQQVIDILELQFNDTVKARYIDKELSNRY
VPRGNKRKIRAQIAIYDYLKNLEQPEPRA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgatcgtctctataccgaaaaagaactaagctggctctctttcaacgaacgt
gtacttcaggaggccgctgacaaaagtaacccgctgattgaaagaatgaggtttttaggg
atctactccaataacctggacgaattttataaagtccgctttgccgatgtcaaacggcgt
attctgatcagtgaagagcaaggctcagccaccaatgcccggcaattgttgaaaaaaatt
cagaacaaagtcgccaggaccgaccaagaatttgactatctttataacgaactgctgctg
gaaatggcccgtaatcagatttttttgattaatgagcggcaaatatccccaaaccaacaa
atctggctacggcaattctttcgccagcacttacgcccgcacattacgccaattgtcatt
aattcagaaaccaatttggttgagtttttgaaggatgattatacctatctggccgttgaa
attatccgtgggcaagaaattcgatatgctctgttggaaatcccatccgataaagtccct
cgtttcgtcaacctgcccccagaaatgccaaaaaaacgtaagtcaatgatattgcttgat
aatattcttcgctatacgttagatgaaattttcaaggggttcttcgattacgatgcgtta
aacgtttactccatgaaaatgacccgtgactctgagtacgatctggcaacagaaatggag
tccagcctgctggaactgatgtcctccacgctgaaacaaagattgacggcagaacctgtg
cggtttgtctatcaacgtgatatgcctgacgaaatggtggaactgctgcggggtaaatta
ggcttgtccaatgatgactcggtgattgcaggtggccgctatcacaattttaaagatttc
atcaaattccccaacgaaggaaaccggaatctgctgaataagcccatgccacggttacgc
cacacttggtttgatcatttccgcaatggttttgatgccattcgtgaaaaagatgtcctg
ctttattatccttatcacacatttgaacatgtgctggaattactgcgtcaggcctctttc
gaccctagtgtgatctctatcaagattaatatttaccgtgttgcaaaagactcgcgcatt
attgactctgtgatccatgcggcccacaacggcaaaaaagtcactgttgtggtggaatta
caagcacgctttgatgaagaagccaatattcactgggcgaaacgtctcaccgaagcaggt
gtacatgttattttttctgctcctggcctgaaaattcacgctaagttgttcatcatttct
cgccttgaaggggagagcattatccgttatgcccatatcggtacaggaaatttcaatgaa
aaaacggcgcgtttatatactgattattctctgttaaccgccaaacctgaagtcaccaat
gaagtacgccgagtgtttaacttcattgaaaacccttatcgcccggtcacatttgataac
ttaatggtatcaccgcaaaattcacgcgcaatgctcaaccaattgatcacgcaggaaatt
gaaaatgcaaaagcgggtgaagcagcaggtattaccttaaaaatcaataatcttgtggat
aaagaattggtagatcggctttatgatgcctcagaagcgggtgtcaaagtgcgtattctg
gtgcgaggcatgtgctctctggtgccaaatcaatcgggttttagtgaaaacatccaggtc
accagtattgtggatcgtttcttggagcacgatcgcgtttacgttttcaccaataaaggc
catgaaaaagttttcctttcctctgccgactggatgacccgcaatatcgattatcgtata
gaagttgcagtttgcctgcttgattccatgctgaaacaacaagttatagatattctggaa
ttacaattcaatgatactgtcaaggcacgttatattgataaggaattaagtaatcgctat
gttccaaggggaaacaagcgtaaaatccgcgcgcaaattgcgatttatgattacctcaaa
aatcttgaacaaccggaaccaagagcttga
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