Xanthomonas oryzae pv. oryzae MAFF 311018: XOO0609
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Entry
XOO0609 CDS
T00360
Symbol
XOO0609
Name
(GenBank) DNA polymerase related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO0609 (XOO0609)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO0609 (XOO0609)
Enzymes [BR:
xom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XOO0609 (XOO0609)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOO0609 (XOO0609)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
DUF2857
Motif
Other DBs
NCBI-ProteinID:
BAE67364
LinkDB
All DBs
Position
660760..662208
Genome browser
AA seq
482 aa
AA seq
DB search
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRV
SADFMQLAASVLCHRDPQRHAVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDT
HKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGE
ALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLNQTMMRQEMPQKYWKNLPEAASLP
ELIREAGVRVREMAERAPEPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPAT
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVK
HFRFEQRGKRRLHRNPERAHLQACSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLM
QERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFER
ER
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgctgaggtggaaccaccgtggagttttgaagcgtggcgtgcgttggcgcgg
gcgggctggtgcgcgcaggcagagccggatgatgtggcctggaacggcggtgcgcagggc
gggctgttgatggggcaggggctgctggaactgccggccgtggtgccgccaccccgtgtc
tcggcagacttcatgcagctggcggcatcggtgctgtgtcatcgcgatccacagcggcac
gccgtgctgtaccgcttgttgtggcgggttgcctgcggcgagaaagcattgctggaacgc
gccaccgatgtggatgtgcaccggctgcggcaatggcagaaggcagtgcagcgcgatacg
cacaaaatgaaggccttcgtgcgcttccgccgcttgcccggggaagaggaagacttcgtt
gcctggttcgagcccgagcactggatcgtggaccgggtagcgccgtttttcgcacgccgt
tttgccggcatgcgctgggcgatcttgaccccgtatcgcagcgtgcgttgggatggcgag
gcgttgagcttcggcgcaggtgcggggcgcacgcaggtgccggccgacgatgcgcaggaa
gcactgtggcgcacctattacgcacatatcttcaacccggcgcggctcaaccagaccatg
atgcggcaggaaatgccgcagaaatattggaagaacctgcccgaagcagcgtcgctgccg
gaactgatccgcgaagccggtgtgcgcgtgcgcgagatggccgaacgcgcgcctgagcca
gtgcggcgacgggtaccggcggcgcctgcgccacagccggatacgacaacccacagcctg
gcgcagttgcgcagcgctgcacgcgattgccggcgttgcgaattgtggcaaccggcgacg
cagacggtattcggcgaggggcccgacgatgcatcggtgatggtgatcggcgagcagcca
ggcgatgaagaggatttaagcgggcgcccgttcgtcgggcccgccgggcgcctgttcacc
atggcgctgggcgagctgggtgtcgatcgccagaggttctacgtgaccaatgcagtcaag
catttccgtttcgaacaacgcggtaaacggcggctgcaccgcaacccggagcgcgcgcac
ttgcaggcatgcagtgggtggttgcaggccgaacgcacgcaattgcgtccagcgcagatc
gtctgcctgggtgcgactgcggcgcaggcggtattgggaagaagcggcttccgattgatg
caggaacgcgggcagtggcagcgcctggacgatggcacgccggtcttgaccacggtgcat
ccgtcctgggtgttgcggcagccatcgacggatgcacgcgaagaaggctatcgcggattt
gtcgaagatctgcgtcagttgctgaacccaccgcagccgcgggaacgatcgttcgagaga
gaaaggtaa
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integrated database retrieval system
