Xanthomonas oryzae pv. oryzae KACC 10331: XOO0670
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Entry
XOO0670 CDS
T00235
Name
(GenBank) DNA polymerase related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO0670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO0670
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XOO0670
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOO0670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
DUF2857
Rab3-GTPase_cat
Motif
Other DBs
NCBI-ProteinID:
AAW73924
UniProt:
Q5H546
LinkDB
All DBs
Position
688802..689908
Genome browser
AA seq
368 aa
AA seq
DB search
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRV
SADFMQLAASVLCHRDPQRHAVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDT
HKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGE
ALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLTQTMMRQEMPQKYWKNLPEAASLP
ELIREAGVRVREMAERAPEPVRPRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPAT
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVA
RCGFASTR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgctgaggtggaaccaccgtggagttttgaagcgtggcgtgcgttggcgcgg
gcgggctggtgcgcgcaggcagagccggatgatgtggcctggaacggcggtgcgcagggc
gggctgttgatggggcaggggctgctggaactgccggccgtggtgccgccaccccgtgtc
tcggcagacttcatgcagctggcggcatcggtgctgtgtcatcgcgatccacagcggcac
gccgtgctgtaccgcttgttgtggcgggttgcctgcggcgagaaagcattgctggaacgc
gccaccgatgtggatgtgcaccggctgcggcaatggcagaaggcagtgcagcgcgatacg
cacaaaatgaaggccttcgtgcgcttccgccgcttgcccggggaagaggaagacttcgtt
gcctggttcgagcccgagcactggatcgtggaccgggtagcgccgtttttcgcacgccgt
tttgccggcatgcgctgggcgatcttgaccccgtatcgcagcgtgcgttgggatggcgag
gcgttgagcttcggcgcaggtgcggggcgcacgcaggtgccggccgacgatgcgcaggaa
gcactgtggcgcacctattacgcacatatcttcaacccggcgcggctcacccagaccatg
atgcggcaggaaatgccgcagaaatattggaagaacctgcccgaagcagcgtcgctgccg
gaactgatccgcgaagccggtgtgcgcgtgcgcgagatggccgaacgcgcgcctgagcca
gtgcggccacgggtaccggcggcgcctgcgccacagccggatacgacaacccacagcctg
gcgcagttgcgcagcgctgcacgcgattgccggcgttgcgaattgtggcaaccggcgacg
cagacggtattcggcgaggggcccgacgatgcatcggtgatggtgatcggcgagcagcca
ggcgatgaagaggatttaagcgggcgcccgttcgtcgggcccgccgggcgcctgttcacc
atggcgctgggcgagctgggtgtcgatcgccagaggttctacgtgaccaatgcagtcgcg
cgctgcggttttgcttcaacacgctaa
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