Xanthomonas phaseoli: XppCFBP6546_16520
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Entry
XppCFBP6546_16520 CDS
T05156
Symbol
XppCFBP6546P_16520
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph00040
Pentose and glucuronate interconversions
xph01100
Metabolic pathways
xph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XppCFBP6546_16520 (XppCFBP6546P_16520)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XppCFBP6546_16520 (XppCFBP6546P_16520)
Enzymes [BR:
xph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XppCFBP6546_16520 (XppCFBP6546P_16520)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ATS31106
UniProt:
A0AB38E594
LinkDB
All DBs
Position
complement(4022926..4024056)
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AA seq
376 aa
AA seq
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MKPKFSTAAAASLFVGSLLLTGVAYADAALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AAELKAALSASVGSNGRIIKVSGIIDISEAKPYTKTSDMKTRARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDIKKGANFVTVSYSAFKSHEKNLIGSSDSASS
TDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNTVYPFSYAHGVGKESKI
FSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNTNIGWTPPYTYNLLSA
DKVAADVKAKAGAGKL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggccgccgcgtcgctgttcgttgggtcgttgctgctc
accggcgttgcctatgccgatgcggcgttggaggttgcaaccacgggctgggcgacccag
aacggcggcaccaagggcggctccaaagcggctgccgccaatatctacaccgtcaagaac
gccgccgaattgaaagcagcattgagcgcaagcgtcggaagcaacgggcgcatcatcaag
gtcagcggcatcatcgacatcagcgaagcaaagccttacaccaaaacctcggacatgaag
acgcgcgcgcgtctggacgtgcccaccaagaccacgctgatcggcatcaccagcaacgcg
gaaattcgcgaaggctatttttacgtcaaggccaacgacgtcatcatccgcaatatcacc
atcgaaaatccatgggacccggaaccggtctgggacccggatgatggcagtgccggcaac
tggaatgcggagtacgacggcctgaccgtggaaggcgccagcaacgtgtgggtggaccat
gtcaccttcaccgatggccgccgtaccgacgatcagaacggcaccgcaaatggccgtccg
aaacagcaccacgatggcgcgatggacatcaagaaaggcgccaatttcgtcaccgtctcg
tactcggccttcaagtcgcacgagaagaacctgatcggctccagcgacagcgcctccagc
accgacagcggcaagctcaaggtcaccattcacaacaccctgttcgaaaacatttctgcg
cgcgctccgcgcgtgcgcttcggtcaggtgcatctgtacaacaactaccacgtcggcagc
accagcaatacggtctatccgttctcctacgcgcatggcgtaggcaaggagtcgaagatc
ttctccgagcgcaacgtgttcgagatcagcggcgtgagtagctgcgacaagatcgctgcc
gactacggtggcagcgtgtatcgcgatcagggttcgttgctcaatggcaaggcgctgtcg
tgctcgtggaataccaacatcggctggacgccgccgtatacctacaacctgctctcggcc
gacaaggtcgctgcagacgtcaaggccaaggcaggcgccggcaagctctga
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