Xanthomonas theicola: G4Q83_14965
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Entry
G4Q83_14965 CDS
T06965
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
xth
Xanthomonas theicola
Pathway
xth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G4Q83_14965 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xth03021
]
G4Q83_14965 (rpoB)
03400 DNA repair and recombination proteins [BR:
xth03400
]
G4Q83_14965 (rpoB)
Enzymes [BR:
xth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G4Q83_14965 (rpoB)
Transcription machinery [BR:
xth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G4Q83_14965 (rpoB)
DNA repair and recombination proteins [BR:
xth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G4Q83_14965 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QNH25800
LinkDB
All DBs
Position
complement(3182669..3186820)
Genome browser
AA seq
1383 aa
AA seq
DB search
MTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENTDPNKRSDHGLHAALKS
VFPISSYSGNAALEYVGYKLGDPVFDERECRQRGMSYGAPLRVTVRLVIYDRESSTKAIK
YVKEQEVYLGEIPLMTDNGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSAR
IIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSVLLRALGYSNEEMLAEFFEINTFHIDPK
EGVQLELVPERLRGETLNFDLADGDKVIVEAGKRITARHVKQLEAAGVAALAVPDEYLVG
RILSHDVVDASTGELLASANDEISEDQLTAFRKAGVDAVGTLWVNDLDRGPYLSNTLRID
PTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSTVGRMKFNRRVGRKDV
TGESVLYDRKYFGERNDEESKRLVAEHADSSDILDVIQVLTEIRNGRGVVDDIDHLGNRR
VRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLS
QFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLI
NSLAVYARTNQYGFLETPYRKVVDGQITDEVEYLSAIEENEYVIAQANALHDAKSRLTEQ
FVPCRYQGESLLKPPAEVHFMDVSPMQTVSIAAALVPFLEHDDANRALMGANMQRQAVPT
LRAQKPLVGTGIERAVARDSGVTVNARRGGVIEQIDAGRIVVKVNEAEIGGGTDAGVDIY
NLIKYTRSNQNTCINQRPLVNVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYN
FEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVV
YIGAEVRAGDIMVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDV
QVFTRDGIEKDKRARQIEENEIKRVKKDFDDQFRILESAIYARLRTQLIGKVANGGPNLK
KGDTITDVYLDGLKKSDWFALRMKDEEPSDAIERAQKQIQAHEKEFERRFADKRGKITAG
DDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSMIQPIEDMPYMANGETVDIVLN
PLGVPSRMNIGQVLEVHLGWAAKGLGRKIQNMLEAQAKVADLRKFLTQIYNHDQKLGEDR
VDLDQFSDAELLALSKNLTDGVPMATPVFDGATEAEIKHMLELADLPISGQTQLYDGRTG
EAFDRHTTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINME
LED
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcttattcgttcaccgaaaagaagcgtatccgcaaggatttcggcaagcagcgc
tcgatcctcgaagtgccgttcctgctggcgatccaggtggattcctaccgcgagttcctg
caggagaacaccgacccgaacaagcgttcggaccacggcctgcatgcggccctgaagtcg
gtgttcccgatctccagctacagcggcaacgccgcgctggagtacgtcggctacaagctg
ggcgacccggtgttcgacgagcgcgagtgccgccagcgcggcatgagctacggcgccccg
ctgcgcgtgaccgtgcgcctggtgatctacgaccgcgagtcgtcgaccaaggccatcaag
tacgtgaaggagcaggaggtctaccttggcgagatcccgctgatgaccgacaacggcacc
ttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagttgcaccgctcgccgggcgtg
ttcttcgaccacgaccgcggcaagacccacagctcgggcaagctgctgtacagcgcccgc
atcatcccgtaccgcggttcctggctggacttcgagttcgacccgaaggacgcgctgttc
acccgtatcgaccgccgccgcaagctgccggtgtcggtcctgctgcgcgcgctcggctac
tcgaacgaagaaatgctggccgagttcttcgagatcaacaccttccacatcgaccccaag
gaaggcgtgcagctggagctggtgcccgagcgcctgcgcggcgagaccctgaacttcgac
ctggccgatggcgacaaggtcatcgtcgaggccggcaagcgcatcaccgcgcgccacgtc
aagcagctggaagccgccggcgtcgccgcgctggccgtgcccgacgagtacctggtcggc
cgcatcctgtcgcacgacgtggtcgatgcctccaccggcgaactgctggccagcgccaac
gacgagatcagcgaagaccagctgaccgcgttccgcaaggccggcgtcgacgccgtgggc
acgctgtgggtcaacgacctggaccgcggcccgtacctgtccaacaccctgcgcatcgac
ccgaccaagacccagctcgaggcactggtcgagatctaccgcatgatgcgtcccggcgag
ccgccgaccaaggatgccgcgcagaacctgttccacaacctgttcttcaccttcgagcgc
tacgacctgtccacggtcggccgcatgaagttcaaccgccgtgtcggccgcaaggacgtc
accggcgagtccgtgctgtacgaccggaagtacttcggcgagcgcaacgacgaggagtcc
aagcgcctggtcgccgagcacgccgacagctccgacatcctggacgtgatccaggtcctg
accgagatccgcaacggccgcggcgtggtcgacgacatcgaccacctgggcaaccgccgc
gtgcgttcggtcggcgagatggccgagaacgtgttccgcgtgggcctggtccgcgtcgag
cgcgcggtcaaggagcgcctgtcgatggccgagtccgagggcctgaccccgcaggaactg
atcaacgccaagccggtggcggccgcgatcaaggagttcttcggctcctcgcagctgtcg
cagttcatggaccagaacaacccgctgtcggaagtgacgcacaagcgccgcgtgtccgcg
ctgggcccgggcggcctgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcatccg
acccactacggccgcgtctgcaccatcgagacgccggaaggcccgaacatcggcctgatc
aactcgctggcggtgtatgctcgcaccaaccagtacgggttcctggagacgccgtaccgc
aaggtcgtggacggccagatcaccgacgaggtcgaatacctgtcggcgatcgaggaaaac
gagtacgtgatcgcgcaggccaacgcgctgcacgatgccaagagccgcctgaccgagcag
ttcgtgccgtgccgctaccagggcgagtcgctgctgaagccgccggccgaagtgcacttc
atggacgtgtcgccgatgcagaccgtgtcgatcgcggccgcgctggtgccgttcctggag
cacgacgacgccaaccgcgcactgatgggcgcgaacatgcagcgccaggccgtgccgacg
ctgcgtgcgcagaagccgctggtcggcaccggcatcgagcgcgcggtggcgcgcgactcg
ggcgtgaccgtgaacgcgcggcgtggcggcgtgatcgagcagatcgacgccggccgcatc
gtggtcaaggtcaacgaggccgagatcggcggcggcaccgacgccggcgtggacatctac
aacctgatcaagtacacgcgctccaaccagaacacctgcatcaaccagcgtccgctggtc
aatgtgggcgacgtgatcgcgcgcggcgacgtgctggccgacggtccctcgaccgacatc
ggcgagctggccctgggccagaacatgctcatcgcgttcatgccgtggaacggctacaac
ttcgaggactccatcctgctttccgagcgcgtggtggaagaggatcgctacaccacgatc
cacatcgaagaactgacctgcgtggcgcgcgacaccaagctggggccggaggagatctcc
gccgacatccccaacgtgtccgagcaggcgctgaaccgcctggacgagtcgggcgtggtg
tacatcggcgccgaggtgcgcgccggcgacatcatggtcggcaaggtcacgccgaagggc
gagagccaactgaccccggaagagaagctgctgcgcgcgatcttcggcgagaaggcctcg
gacgtgaaggacagctcgctgcgcgtgccgccgggcatggacggcaccgtcatcgacgtg
caggtgttcacccgcgacggcatcgagaaggacaagcgcgcccgccagatcgaggaaaac
gagatcaagcgggtcaagaaggacttcgacgaccagttccgcatcctggaaagcgcgatc
tatgcgcgtctgcgcacccagctgatcggcaaggtcgccaacggcggtccgaacctgaag
aagggcgacaccatcaccgacgtgtacctggacgggctgaagaagtccgactggttcgcg
ctgcggatgaaggacgaggagccgtcggacgcgatcgagcgcgcgcagaagcagatccag
gcgcacgagaaggaattcgagcgtcgcttcgccgacaagcgcggcaagatcaccgccggc
gacgacctcgccccgggcgtgctgaagatggtcaaagtgttcctggcggtgaagcgccgc
atccagcccggcgacaagatggccggtcgccacggcaacaagggtgtcgtgtcgatgatc
cagccgatcgaggacatgccgtacatggccaacggcgagaccgtggacatcgtgctgaac
ccgctgggcgtgccgtcgcgcatgaacatcggccaggtgctggaagtgcatctgggctgg
gccgccaagggcctgggtcgcaagatccagaacatgctcgaggcccaggccaaggtcgcc
gacctgcgcaagttcctgacccagatctacaaccacgaccagaagctgggcgaggaccgc
gtggacctggaccagttcagcgacgccgagctgctggcgctgtcgaagaacctgaccgac
ggcgtgccgatggccaccccggtgttcgacggtgcgaccgaagcggagatcaagcacatg
ctcgaactcgccgacctgccgatcagcggccagacccagctgtacgacggccgcaccggc
gaggcgttcgaccgccacaccacggtcggctacatgcacatgctgaagctgaaccacctg
gtcgacgacaagatgcacgcgcgctccaccggtccgtactcgctggtcacccagcagccg
ctgggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaagtctgggcgctg
gaagcctacggcgcggcctacaccctgcaggaaatgctgacggtgaagtccgacgacgtg
cagggccgcaaccagatgtacaagaacatcgtcgacggcgagcacgagatggtcgcgggc
atgccggaatccttcaacgtcctggtgaaggaaatccgctcgctggccatcaacatggaa
ctggaagactga
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integrated database retrieval system
