Xenopus tropicalis (tropical clawed frog): 100038123
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Entry
100038123 CDS
T01011
Symbol
tuba1a
Name
(RefSeq) tubulin alpha-1A chain
KO
K07374
tubulin alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04210
Apoptosis
xtr04530
Tight junction
xtr04540
Gap junction
xtr04814
Motor proteins
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100038123 (tuba1a)
09143 Cell growth and death
04210 Apoptosis
100038123 (tuba1a)
09144 Cellular community - eukaryotes
04530 Tight junction
100038123 (tuba1a)
04540 Gap junction
100038123 (tuba1a)
09142 Cell motility
04814 Motor proteins
100038123 (tuba1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100038123 (tuba1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100038123 (tuba1a)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100038123 (tuba1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100038123 (tuba1a)
04147 Exosome [BR:
xtr04147
]
100038123 (tuba1a)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100038123 (tuba1a)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100038123 (tuba1a)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100038123 (tuba1a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100038123 (tuba1a)
Exosomal proteins of other body fluids (saliva and urine)
100038123 (tuba1a)
Exosomal proteins of colorectal cancer cells
100038123 (tuba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
100038123
NCBI-ProteinID:
XP_002935154
Xenbase:
XB-GENE-492543
UniProt:
F6YT71
LinkDB
All DBs
Position
2:complement(136577392..136581829)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatacacgttggccaggctggtgtgcagatcggcaatgcctgc
tgggaactgtattgtctggaacatggcatccaacctgatgggcagatgcccagtgacaag
accattggaggaggggacgactccttcaacacctttttcagtgaaactggagcaggaaag
catgtccccagggctgtctttgtagacttggaacccactgtcattgatgaggtgcgcact
ggcacataccgccaactcttccacccagagcaacttatcactggaaaggaagatgctgcc
aataactatgcccgtggtcactacacaattggcaaggagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcacaggtctccagggtttcctggtcttccacagc
tttggtggtggtactggttctggattcacctccctgctgatggagcgtctctctgttgat
tatggaaagaagtctaaactagagttctccatctatccagctcctcaggtctccacagct
gtggttgagccctacaactctatactcaccactcacaccaccctggagcactctgactgt
gctttcatggtagacaatgaggccatttatgacatctgccgcaggaatctagatattgaa
cgcccaacctacaccaacctgaacaggcttataggccagattgtgtcttccatcacagcc
tctctgaggtttgatggagccctgaatgtagatctcacagagttccagaccaacttggtg
ccctatccccgtattcacttccctcttgccacctatgcccctgtcatctctgcagagaag
gcttatcacgagcagctttctgttgctgagatcacaaatgcctgctttgaaccagctaac
cagatggtgaaatgtgatccacgccacggtaaatacatggcttgttgcctgttgtaccgt
ggtgatgtggtacccaaagatgtaaatgcagctattgccaccatcaagacaaagcgtacc
atccagtttgtggattggtgcccaactggtttcaaagttggtatcaactatcagccccca
actgtggttccagggggagacctggctaaggtgcagcgtgctgtgtgtatgctgagcaat
accactgcaattgctgaggcctgggctcgtctggaccacaagtttgatctcatgtatgcc
aagcgtgccttcgtgcactggtatgtgggtgagggtatggaggagggtgagttctctgag
gcccgtgaagacatggctgccctggagaaggattatgaggaggttggtgtagactctgtg
gaaggagagggtgaagaggaaggagaagaatattaa
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