Xenopus tropicalis (tropical clawed frog): 100124319
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Entry
100124319 CDS
T01011
Symbol
siah2
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100124319 (siah2)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100124319 (siah2)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100124319 (siah2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
100124319
NCBI-ProteinID:
NP_001095281
Xenbase:
XB-GENE-1004950
UniProt:
A4IIN1
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All DBs
Position
5:118284205..118292623
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AA seq
318 aa
AA seq
DB search
MSRPSSAGPCASKPCGKQKQPPPPPPPHAASLSLPATISGGPGSSAPPPPAAAAAAITGP
LSQQHQELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRASLTPSIRNLA
MEKVASAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQ
HLTHSHKSITTLQGEDIVFLATDINLPGAVDWVMMQYCFNHHFMLVLEKQEKYEGHQQFF
AIVLLIGTRKQAENYAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIAHL
FADNGNLGINVTISTCCP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgtcctctgccggaccctgcgctagcaaaccgtgtggcaagcaaaagcag
ccgccgccaccaccgccaccccacgctgcgtctctgtcgctgcctgccacgatttccggc
ggtcccggctcctctgcccccccacccccggcggcggcagcagcagcaatcacgggcccg
ctgtcccagcagcaccaggagctgacgtcgctgttcgagtgtccggtctgttttgactat
gtcctgccgcctatcctgcagtgccaggccgggcacctggtgtgtaaccaatgccgccag
aagctgagctgttgcccgacttgcagggcctccctcaccccgagtattcggaacctggca
atggagaaagtggcctctgctgtcctattcccctgcaagtatgcttctactggatgctct
ctatctctccatcacactgagaagccagaacatgaggacatctgtgaataccggccatac
tcctgcccttgtcccggagcgtcctgtaaatggcagggatcattggaaaatgttatgcag
caccttacccactcccacaagagcatcaccacccttcagggagaagatatagttttcctt
gcaacagacattaacctgcctggtgctgtcgattgggtgatgatgcagtactgttttaac
caccattttatgttggtgctggagaaacaggagaagtatgagggacaccagcagttcttt
gccattgtcctccttataggcacacgaaagcaagctgagaattatgcctacagacttgaa
ctcaatggaaaccggaggcgcttgacatgggaagctacgccaaggtccatccatgacggg
gtagctgccgcaatcatgaacagtgattgcttagtttttgatactgcaattgcacacttg
tttgcagacaatggaaacttgggcatcaatgtaaccatatccacatgttgtccatga
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