Xenopus tropicalis (tropical clawed frog): 100124891
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Entry
100124891 CDS
T01011
Symbol
pkp2
Name
(RefSeq) plakophilin-2
KO
K12642
plakophilin 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04382
Cornified envelope formation
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100124891 (pkp2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100124891 (pkp2)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ARM_PUB
ZER1-like_2nd
Arm_2
Atx10homo_assoc
HEAT_EZ
SelP_C
ATP-grasp_5
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
100124891
NCBI-ProteinID:
NP_001096312
Xenbase:
XB-GENE-5825462
UniProt:
A4IHT2
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Position
3:2930130..2961995
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AA seq
808 aa
AA seq
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MALVMPPGGEQGYIRTVLGYEHFQELDSSTLALPSEERLKLTAKEPVDKAQRIQQQVRLT
LARRGNKSVGNGSLHHASSLPEQVHYNGGFTHKDVFSSASKRYDTIKDGRYTGYENGVGG
NKVTFSEWRSECDTRRPTLRRDVSPEGEREVSWSPFYPDAPSATKRYARSDIVGLNRYKT
ASRARQNLSQQFRQDTTDSVFAPSVPASVPASPIYPQWRHSRSMENLLEQHQVGQPGAVG
QVRVGQAGQLGSTKAQTMRSKWNQSTVRTATKDSFNSTVGGVTFERRVPLLAGASGTLQM
QRGGSQVEAHVGNVSSLLEVEMTLERAVNLLQSETSSSQWLCSAASFIQHECFRKSDARR
QVYNLGGIPRLIRQLKGDSEEVQRASCAALRNLVFEDNDNKLEVCEQRGIPVALKLLGET
QDLEIKRQITGLLWNLSSNDQLKSCLIRDALKPLTRTIIIPSSGWGEGEYSKSSALSDPD
IFYNATGCLRNMSSAGPEGRKAMRDCEGLIDALVHYTRGSIADYKPDDKATENCVCILHN
LSYQLEAELPGTYTQSIYRAGRGAPRSEEETVGCFGTRSRKIKEQWGEAPMAEEKNNPRG
VEWLWHSILVRMYLSLIAKSNRNYTQEASLGALQNLTAGTGPMPSTVAHMIIQKETGLQH
IRNILNSSDSGVKRTAVSLLRNLSRYSNLQNEIAREVLPDLVRLVPGAVPETSVANETAA
SVCYVINNLISKSSESARAVLSNGGVPKLSSLSISDSNLATKTGKAASIVLYSMWAHQDL
HSTYKKSLYKKADFVNPRTLKAYNSLRD
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtgatgcccccggggggggagcaggggtatatccgcacggtactggggtac
gaacacttccaggagttggacagttctaccctggctctgccctccgaggagcggctcaaa
ctcactgccaaggagcctgtggataaagcgcagaggatccagcaacaggtccggctcacc
ctggcccggaggggcaacaagagtgtagggaacgggagtctccatcatgcctccagcctc
ccagagcaggttcattacaatggaggcttcacccacaaagatgtgttttcctcagcctct
aaacgttatgacaccataaaggacggcagatacacgggatacgagaatggcgttgggggg
aacaaagtgacgttcagcgagtggagaagcgaatgcgacacccggcgcccgacgctgcgg
cgcgacgtctcccccgagggagagagagaggtcagttggtcgccattttaccccgacgcc
cccagcgccaccaagcgctacgcccgctccgacatcgtcgggttgaaccggtacaagaca
gcgagtcgggcccgacagaacctctcgcagcagtttcgccaggacacgaccgactccgta
tttgcccccagtgtccccgccagtgtccccgccagccccatttacccccagtggcgccac
agccgcagtatggagaacctgctggagcagcaccaagtcgggcagccgggcgccgtcggg
caggtgagggtcgggcaggcggggcagttgggctccaccaaagcgcagactatgaggtcc
aagtggaaccagagcaccgtcagaaccgcgaccaaagattccttcaactcaactgtaggg
ggcgtcaccttcgagagacgggttcccctattggccggggcctcggggaccctacagatg
cagagagggggcagccaagtggaagctcatgtggggaatgtctcgtccctgttggaggtg
gagatgaccctggagagagcggtgaatctgctgcagagcgagacctcctcgtcccaatgg
ttgtgttccgccgccagcttcatccagcacgagtgcttccgcaagtccgacgcccgcaga
caggtttataatctcggggggatcccccggctgatccggcagctgaagggcgacagtgag
gaggtgcaacgggcatcgtgcgccgcgctgcgcaacttggtgttcgaggacaatgacaac
aaactggaggtgtgtgagcagcgcgggatccccgtggccctcaaactgcttggggagacc
caggacttggagataaagcgccagatcacagggctgctgtggaacttgtcctccaacgac
caactaaagagctgcctcatccgggacgccctgaagcccctcaccaggaccatcatcatc
cccagctcggggtggggggagggggagtactccaaaagctccgccctgtcggaccccgat
atcttctacaatgccaccggctgcctcaggaacatgagttccgccgggccagaggggagg
aaggccatgcgcgactgcgaggggctgatagatgcgctggtgcattatacccggggcagc
atcgctgactacaaacccgacgacaaggcgacagagaactgcgtgtgtatcctgcacaat
ctctcgtaccaactggaggccgagctgcccggcacttacacccagtccatctatcgggcc
ggccggggggccccccgctccgaggaggagaccgtcgggtgtttcggaacccggagcaga
aaaataaaggagcaatggggggaagcgccgatggccgaggagaagaacaacccccggggg
gtggaatggctgtggcactcgatccttgtgcgaatgtacctgtcactcatcgccaagagc
aaccggaactacacccaggaggcatcactgggggccctccagaacctcactgccggcacc
ggcccaatgccgtcgactgtcgctcacatgatcatacagaaggagaccggcctccagcac
atacggaatatactcaattccagtgattccggagtgaaacggacggcagtctcgctgctg
agaaacctgtctcgctactccaacctccagaatgagatcgcaagagaggttctgccggac
ctggtgcggttggtccccggcgcagtcccagagaccagtgtggccaatgagacggcggcg
tccgtctgttacgtcatcaacaacttaatctccaagagctcggagagcgcccgggcggtg
cttagtaacgggggggtccccaaactcagcagcctcagcatcagcgacagtaatttggct
accaagacgggcaaggcggcctccattgttctgtacagcatgtgggcccaccaggacttg
cacagcacctacaaaaagtccctgtacaagaaggcagatttcgtcaacccccgcaccctg
aaggcttacaattcgctccgagactga
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