Xenopus tropicalis (tropical clawed frog): 100125119
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Entry
100125119 CDS
T01011
Symbol
cad
Name
(RefSeq) CAD protein isoform X1
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00240
Pyrimidine metabolism
xtr00250
Alanine, aspartate and glutamate metabolism
xtr01100
Metabolic pathways
xtr01240
Biosynthesis of cofactors
Module
xtr_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
100125119 (cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
100125119 (cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100125119 (cad)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
100125119 (cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
100125119 (cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
100125119 (cad)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
100125119 (cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
100125119 (cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
Amidohydro_1
ATP-grasp_3
GARS_A
Peptidase_C26
GSH-S_ATP
Motif
Other DBs
NCBI-GeneID:
100125119
NCBI-ProteinID:
XP_031757790
Xenbase:
XB-GENE-5878289
UniProt:
F7D2L7
LinkDB
All DBs
Position
5:162269294..162317718
Genome browser
AA seq
2248 aa
AA seq
DB search
MAAGTAVLLLEDGTRVSGTVFGAVRPVSGEVVFQTGMVGYPEALTDPSYRAQILVLTYPL
IGNYGIPQDELDQFGLSRWFESSKIHASALIIGERSRNPSHWSCDISLNQWLKQQGIPGL
EGVDTRALTKKIREKGTLLGKLIPVGTEESQVPYEDPAKRNLVQEVSLKEPRVYNAGGTV
RIAALDCGLKFNQIRCLCQRGAEVTVLPWDYPISSAECDGLFLSNGPGDPTFCQSSVRNI
RDFISEEKPKPVFGICLGHQILSLVIGAHTYKMKYGNRGHNQPCIHESSRRCFITSQNHG
YAVDPNTLPEGWSPLFTNANDQSNEGIIHDSKPFFSVQFHPEHCAGPMDLVGLFDVFLDT
VRDRKAGDSGEKTVKQRVTELLTYKESPSVTDLEASRPHKVLILGSGGLSIGQAGEFDYS
GSQAIKALKEENIQTVLINPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGILLT
FGGQTALNCGVELTKQGVLEKYNVRVLGTPVKSIEMTEDRKVFVEKMEEIGEHVAPSEAA
FSLEQAQAAAERLGYPVLVRSAYALGGLGSGFASTKEELTALVCQAFAHTTQVLVDKSLK
GWKEIEYEVVRDAYNNCVTVCNMENVDPLGIHTGESIVVAPSQTLNDREYNMLRNTAIKV
IQHLGIVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLALGIPL
PVLRNSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMSVGRNFEE
AFQKALRMVDENCVGFDHCIKSASDEELETPTDKRIFVLAAALRAGYTIERLYELTKIDR
WFLHKMKNITDQVATLESYHQDETLMPREVLLRAKQLGFSDKQIALAVQSTELAVRKMRQ
ELLILPVVKQIDTVAAEWPAQTNYLYLTYNGTEHDLAFEEPHVMVIGSGVYRIGSSVEFD
WCAVGCIQELRKMGFKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYELENPEGII
LSMGGQLPNNIAMSLHRQQCRVLGTSPEAIDSAENRFKFSRMLDTIGISQPQWKELSDME
SAVQFCNTVGFPCVVRPSYVLSGAAMNVAHSDGDLEKVLSNAVAVSKEHPVVISKFIQEA
KEIDVDAVACDGVVVAVAISEHVENAGVHSGDATLVTPAQDITPKTLERIKAIVHAVGLE
LQVNGPFNLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVNLVALATQVIMGEEVEPVGV
MTGTGIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPQ
KNILLTIGSYKNKSELLPTVRAMESLGYSLYASLGTADFYTEHGIKVKAMDWPFEESEND
GPLREKQGSIMDHLSENHFDLVINLSMRNSGGRRLSSFVTRGYRARRLAVDYSVPLIIDI
KCTKLFVEALRQIGGAPPVKTHVDCMTSQKLIRLPGLVDIHVHLREPGATHKEDFSSGTA
AALAGGITLVCAMPNTSPAITDASSFSLAQKLAEAGARCDFALFLGASSENAASLSSMAS
SAAGLKMYLNDTYSQLKMDNVSVWMEHFEKWPAHMPIVAHAEKQTVAAILMVAQLYQRPV
HICHVAKKEEILIIKAAKQKGIQVTCEVAPHHLFLCLDDLKKIGETRGQVRPMLGTREDL
ESLWENLDIIDCFATDHAPHSVEEKDGPNPPPGYPGLETMLPLLLTAVSEGRLTIDDIIK
RLYDNPQKIFSLPVQENTYVEVDLEQEWVIPSHMQFTKSRWSPFAGMKVKGAVRRVVLRG
EVAYIDGQVLVPMGYGQDVRKWTPPVVAQSHPVAIKEIPKTPERHRHVTVQSETIRSRAP
SPRRPCQSGDGRFHLPPRVHRASDPGFPAEEQKEKAPKRPVEPELVPIQDGYSHPPPIPR
IMSPQSTSMQSAPHVQTSPLLHPLIGQHILTVKQFSKDQMSHLFNVAHTLRMLVQKERNL
DILKGKVMASMFFEASTRTSSSFAAAMQRLGGSVLSFCETTSSSQKGESLTDSVQTMSCY
SDVLVVRHPEPGAVELAAKHCRKPVINAGDGVGEHPTQALLDIFTIREELGTVNGMIITM
VGDLKHGRTVHSLACLLTQYRVTLRYVTPRSLRMPSNIIHFVASKGIKQEEFESIEEALP
DTDVLYMTRIQKERFNSTDEYNACFGQFILTPHIMTRAKKKMVVMHPMPRVNEISFEVDS
DPRAAYFRQAENGMYIRMALLATVLGKY
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgggtactgcggtgctactgctggaggatggaacccgggtatccggaaccgtg
ttcggggcggtgcgtccggtgtccggggaagtggtgttccagacgggcatggtgggctac
cccgaggccctcaccgacccctcctacagggcccagatcctggtactgacatatccgctg
attgggaactacgggatcccgcaggatgaactggaccagtttggcctcagtcggtggttc
gagtccagcaagattcacgcctcggcgctgattattggggagcggtcccggaaccccagt
cactggagctgtgacatctcattgaaccagtggctcaaacagcagggaatccccggactg
gaaggtgtggatacccgggcactcaccaagaagatccgagagaagggcaccctgctgggc
aagctcataccagtgggcacagaggagagccaggtcccttatgaagatcctgccaagagg
aacctggttcaggaggtgtcattgaaggagccccgagtgtacaatgcggggggcacagtg
agaatcgctgccctggactgtggtttgaagttcaaccagattcgctgcctgtgccagagg
ggggccgaggtgacggtgctgccatgggactatccaatcagcagtgcagagtgtgacggc
ctgttcctcagtaacggccccggggaccccacgttctgtcagagctccgtgcggaacatc
agggacttcatttccgaggagaagccgaaacccgtgtttgggatctgtctgggccaccag
atcctctctctggttataggcgcccacacctacaagatgaagtacgggaatcgtgggcac
aaccagccgtgcatccatgagagctctcggcgctgcttcataacctcacagaaccatgga
tacgccgtggacccaaacactttaccggaaggctggtctcctctgttcacgaatgccaac
gaccaatcaaatgagggaattatccatgattctaagccctttttcagtgtgcagttccac
cccgagcactgtgctgggcccatggatctggtcggcctgtttgatgtgttcctggacact
gtgagagaccggaaggctggagattcaggagagaagacggttaaacagcgagtgactgag
ctgctcacatacaaggagtctcccagtgtcacagacctagaggcctctcgcccacacaaa
gtgctgatcctgggctcaggggggctgtcgattggccaggccggggagttcgactactct
ggctcccaggccatcaaagctctgaaggaagagaacatccagactgtcctgattaacccc
aacatcgccacagtgcagacatcgaaaggcctcgccgacaaggtttatttcctgccaatc
acccctgaatatgtcactcaggtgataaagaatgagcggccagatgggatcctcctgacg
tttgggggtcagactgcattgaactgtggggtggagctgaccaagcagggagtcctagag
aagtacaatgtgcgggttctggggacccctgtgaagtccattgaaatgacggaagatcgc
aaagtgtttgtggagaagatggaggagattggagaacacgtggcccccagtgaggcagct
ttctccttagagcaggcccaggctgctgcagaacgtctcgggtatccggttttggtccgg
tcggcctacgcgctgggcggccttggatctggatttgccagtaccaaggaggagttgact
gccctggtgtgccaggccttcgcccacaccacacaggtcctggtggataaatccctgaag
ggctggaaggagatagagtacgaagtcgtgcgggacgcctataataactgtgtcacggtg
tgcaacatggagaacgtagatcccctgggcattcacactggcgagtccatcgtggtagct
cccagccagacgctgaacgatcgagagtacaacatgctgcgcaacacggccattaaggtt
atccagcacctcggcattgtgggcgagtgtaacatacagtacgccctaaacccggagtct
gagcagtattacatcatcgaggtgaacgcacggctgtctcgcagctcagccctggcgagt
aaagcaactggttaccccctggcgtatgtggctgccaagctggcactgggaattcctctg
cccgttctcagaaactccgtgaccaactccaccacagccaactttgagcccagcctggat
tactgtgtggtgaaggttccgcgctgggacctgagcaagttcttgcgagtcagcaccaag
attggcagctccatgaagagtgtgggggaggtcatgtctgttggtaggaactttgaagaa
gccttccagaaagctctgcgcatggtggacgagaactgcgtgggctttgatcactgcatc
aaatccgcatctgatgaggaactggagacgccgacagacaagaggatcttcgttctggcc
gctgccctgcgtgcaggttacactatcgagcgcctttatgagttgaccaagattgacagg
tggttcctccataagatgaagaatattactgatcaggtggccacgctggagtcctaccac
caggatgagaccttgatgccccgtgaggtccttctccgagccaaacagctgggcttctcc
gacaagcagattgccctggccgtgcagagcacggagctggcagtccgcaagatgcggcag
gagctgctgattttgccggtagtaaagcagattgacacggtggcggcggagtggccggct
cagaccaattacctgtatctgacctataatggaactgagcacgacttggcctttgaggag
ccgcatgttatggtgattggctctggtgtttaccgaataggcagcagtgtggagtttgat
tggtgcgcggtgggctgcatccaggaactgcgtaagatgggatttaagaccatcatggtg
aattataaccccgagactgtcagcacagactatgacatgtgtgaccgcctgtattttgac
gagatctcatttgaggtggtgatggatatctatgagctggagaacccagagggaatcata
ctgtccatgggtggccagctgcccaataatattgccatgtccctacatcgccagcagtgc
cgggtgctgggcacttctcctgaggccatcgactccgctgagaacaggtttaagttttct
cgcatgttggacacgatcggaatcagtcagccgcagtggaaagagctgtctgacatggag
tcggccgttcagttctgtaacaccgtcggtttcccctgcgtggtgcgcccatcctacgtg
ctaagtggagccgccatgaatgtggcccattcagatggagacctggagaaggtgctcagt
aacgctgtggctgtgtccaaggagcatcccgtggtcatctctaaattcatccaggaggcc
aaggaaattgatgtggatgctgtggcatgtgatggagttgttgtggccgtggctatttca
gaacatgtggagaatgctggggttcactctggggatgccacactggtgacccctgctcag
gatatcacccccaaaaccttggaaaggattaaagccattgtccatgctgtggggctggag
ctccaagtcaacggaccctttaacctgcagctcattgcaaaggacgaccagctgaaagtg
atcgagtgcaatgtccgtgtgtcgcgctcctttccctttgtatcgaagactctgggagtc
aatctagtcgctctggcaacgcaagtcattatgggagaagaggttgaacctgttggtgtg
atgactggtactggcattgtaggggttaaggtcccacagttctcgttctcacgcttggcc
ggcgcggacgtggtccttggggtggagatgaccagcaccggggaggttgcctgctttgga
gagaaccgatacgaggcctatctaaaagccatgctaagtaccggcttcaaaattccacag
aagaacatcctactgaccatcgggagctacaagaacaagagtgagctgctgcccacggtg
cgagccatggagagtcttggctacagtctgtatgccagcctgggaactgctgacttctat
acggagcatggcatcaaggtaaaggcaatggattggccctttgaggagagtgagaatgac
gggcccctacgggagaagcagggcagcatcatggaccatctgtcagagaatcactttgat
ttggtcattaatttgtccatgcggaattctggggggcgccgactctcctccttcgttacc
cgtgggtaccgtgcccgccgcttggctgtggactattctgtgcccctcatcattgatatc
aagtgcaccaaactctttgtggaggctctgcgtcagattgggggggcgccccctgtgaag
actcatgtcgactgtatgacctcacagaaacttatcaggctgccaggcctagtggacatc
cacgtgcacctgcgggaacctggcgctactcataaggaggacttttcttctggcacagca
gctgccctggctggtggaattacccttgtatgtgccatgcccaacaccagcccagccatc
actgatgccagttccttctctctggcacagaagctggcagaggccggtgcccgctgtgac
tttgccctcttcctcggtgcttcctcagagaatgccgcttctctttcttcgatggccagt
tcagccgccggccttaagatgtatctgaacgacacctattcgcagcttaagatggacaat
gtttctgtgtggatggagcactttgagaagtggccggcacacatgcccattgtggcccat
gcagagaaacagaccgtggcggcaattctcatggtggctcagctgtaccagcgccctgtg
cacatttgccacgttgcaaaaaaagaggagatccttattatcaaagcagccaagcagaag
ggaatccaagttacatgcgaggtggcccctcatcaccttttcctgtgtctcgatgatctg
aagaaaatcggggagacacgggggcaagtacgtcccatgttggggactcgggaggatcta
gaatctctgtgggagaacttggatataatagactgttttgccactgaccacgcccctcac
tctgtggaggagaaggacggtccaaacccacctccagggtatcccggcttggagaccatg
ctgcctctgctactcacagcagtcagtgagggacgtctgactattgatgatatcattaag
cgcctgtacgacaacccccagaagatcttctctttgcctgtgcaggagaacacctatgtc
gaggtggatttggagcaagagtgggtgatcccgtcacacatgcagtttaccaagtccaga
tggagcccctttgctggaatgaaggtgaaaggagcagtgcggcgagttgttctccgtggg
gaggtggcctacattgatgggcaggtactggtacccatgggatatggacaggatgtcagg
aaatggaccccacctgttgttgcccaatctcacccagtcgccattaaagagatccctaag
accccagagcgacatcgccatgttacggtacaaagtgagacgattcgcagtcgagcacca
agcccccgcagaccctgtcagtccggagacgggcgcttccacttgcctcctcgagtgcat
cgtgcatcagatcctggcttcccagctgaggagcagaaagagaaggcacccaagagaccc
gtggagccagagctggtacccattcaggatggctattcccaccctcctcccatccccagg
attatgtctccccagagtacgtccatgcaaagtgccccccacgtgcagacctcacccctg
ttgcacccgttgattggccaacacatcctgacggttaaacagttcagcaaagaccagatg
tcgcatctgttcaacgtggcgcacacgctgcgcatgctggtgcagaaggagaggaacctt
gatatcctaaagggcaaggtgatggcctccatgttttttgaggcaagcacacggacaagc
agctcttttgctgcagctatgcaacgccttgggggctctgtgctcagtttctgtgagaca
acctcctcttctcaaaaaggagagtccctcaccgactctgttcagacaatgagctgctat
tcggatgtccttgtggtgagacacccagagcctggagctgtggagcttgctgccaagcac
tgccggaagcctgtgataaatgctggggatggcgtcggcgagcaccccactcaggcccta
ctggacattttcacaatccgtgaagagctgggcacagtcaatggaatgataataacgatg
gtgggagatctgaaacatggccggacagttcattccctcgcctgcctcttaacacagtac
cgtgtgaccttgagatacgtgactccccgcagcctccgtatgccctccaacatcatacac
tttgtagcctccaagggcattaagcaggaagagtttgagagcattgaagaggctctgcca
gatacagatgtgttgtatatgacccgaatacaaaaggagagatttaattctactgacgaa
tacaatgcttgctttggccagtttatcctgacgccgcacatcatgaccagggccaagaag
aaaatggtggtaatgcatccgatgcctcgtgtgaatgagatcagctttgaagtggattcc
gaccctcgggcagcttactttcgccaggctgagaatggcatgtatatccgcatggctctg
ctagcaacggttttgggaaaatactag
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integrated database retrieval system
