Xenopus tropicalis (tropical clawed frog): 100135106
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Entry
100135106 CDS
T01011
Symbol
chrna4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100135106 (chrna4)
04082 Neuroactive ligand signaling
100135106 (chrna4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100135106 (chrna4)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100135106 (chrna4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
100135106
NCBI-ProteinID:
NP_001107315
Xenbase:
XB-GENE-5994598
UniProt:
A9JRM3
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Position
10:2089080..2122601
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AA seq
734 aa
AA seq
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MGARIPRGARLSANMGARIPCGARLSANMGARIPCGARLSANMGARIPSGARLSANMGAR
IPRGASLSANMGARIPSGARLSANMGARIPSGARLSANMGARIPRGARLSANMGARAQTL
LLLLGGFFSTAFCHIETRAHAEERLLKGLFSGYNKWSRPVANISDAVMVRFGLSIAQLID
VDEKNQMMTTNVWVKQEWHDYKLRWDPLEYENVTSIRIPSELIWRPDIVLYNNADGDFAV
THLTKAHLFHDGRIKWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDRAKIDLISMH
SHVDQLDYWESGEWVIVNAVGNYNIKKYECCTEIYSDITYSFIIRRLPLFYTINLIIPCL
LISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMI
FVTLFIIITVFVLNVHHRSPRTHTMPAWVRRTFLDVVPRVLFMKRPAKDNCKKLIESLHA
RSFNPPPRLWSEAEIEPAFASSSSASPTSQRPSPTSSCCHQLEQSPNAQVFCKSPSGQYS
MLCEESALTSCPSPKPETKLLSEAQPNLMPKVRSVSVQQMYTPKEANEGAVRCRSRSIQY
CFLHEDFSQANGQASSSPVAQKGNGNEPQPSSHTSPCTCKPKSQEKPVDPSQGAKTVNAK
EHHVLLMSPSLKLAIEGVHYIADHLRAEDADFSVKQDWKYVAMVIDRIFLWMFIIVCLLG
TVGLFLPPWLAGMI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcccggataccgaggggtgccaggctctctgccaacatgggtgcccggataccg
tgcggtgccaggctctctgccaacatgggtgcccggataccgtgcggtgccaggctctct
gccaacatgggtgcccggataccgagcggtgccaggctctctgccaacatgggtgcccgg
ataccgaggggtgccagtctctctgccaacatgggtgcccggataccgagcggtgccagg
ctctctgccaacatgggtgcccggataccgagcggtgccaggctctctgccaacatgggt
gcccggataccgaggggtgccaggctctctgccaacatgggtgcccgggcacaaacactc
ctcctgctcctgggcggcttcttctctacggctttctgccacattgagacacgagcgcac
gcagaggagcgactcctgaaaggtctcttcagcggatacaacaagtggtctcgccccgtg
gccaatatctccgatgctgttatggtccggtttggtctctccatagcccaactcatcgat
gtggatgaaaagaatcagatgatgacgactaacgtgtgggtaaagcaggagtggcacgac
tacaagctgcgctgggaccccctggagtatgagaacgtcacatccatccggatcccctcg
gagctgatctggcggccggacattgtcctgtataacaatgccgacggggactttgccgtg
acccatctcacaaaggctcatctcttccacgatggtcggatcaagtggacaccaccagcc
atctacaagagctcctgcagcatcgacgtcaccttcttccccttcgaccagcagaactgc
accatgaagtttggctcttggacttatgaccgagccaagatagacttgatcagcatgcat
agccacgttgaccagctggactattgggaaagtggtgaatgggtaattgtcaacgcggtg
ggcaactataatatcaagaaatatgagtgttgcacggagatttattccgacatcacctat
tccttcatcataagacgtctccccttgttctacaccatcaacctcatcatcccgtgtctc
ctgatctcctgtctcaccgtgttggtcttctacctcccttctgagtgtggagagaagatc
acgctctgtatatcagtgctgctttccttgactgtcttcctcctcctcatcaccgagatc
attccttcgacgtctctggtcatccctttgattggagagtacctgctcttcaccatgatc
ttcgtgactctcttcatcatcatcaccgtctttgtgctgaacgtgcaccacagatctccg
cgcacacacaccatgccagcctgggtccgtaggacattcctggatgtggttcctcgagtg
ctcttcatgaagagaccagcgaaagacaattgcaagaaattaatagagtccctgcatgca
agaagcttcaaccccccacccaggctttggtctgaggccgagatcgagccggcatttgcc
agttcgtcatccgctagccccactagccaacgaccatctccaacgtcttcctgttgccat
cagctggagcagtcgcccaacgctcaagtcttttgcaagtccccatcagggcagtattcc
atgttgtgtgaggaatctgccctaaccagttgcccttctccaaagcctgagactaagcta
ctgtccgaggcccagccaaatttgatgcccaaggtgcgttctgtaagcgtgcagcagatg
tacacccccaaggaggccaatgaaggtgccgtccgctgccgatcgaggagcattcagtat
tgcttcctgcatgaagatttctcccaggctaatggccaggctagcagttccccagtagcc
caaaaaggcaatgggaatgagccacagccttccagccacacctctccttgtacgtgtaag
cccaaaagccaggagaagccagtagacccaagtcaaggtgccaaaacagtcaatgccaaa
gaacaccacgtgctgctaatgtccccctcgctcaagttggctatagagggggtgcactac
atcgcggaccacctgagagcagaggatgccgacttctcggtgaagcaggactggaaatac
gttgccatggtgatcgatcgcatcttcctgtggatgttcattattgtctgcttgctggga
acggtcggactcttcctgcctccgtggttggctggaatgatatga
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