Xenopus tropicalis (tropical clawed frog): 100158547
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Entry
100158547 CDS
T01011
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100158547 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100158547 (ttc37)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100158547 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_17
TPR_14
TPR_8
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_11
TPR_12
ANAPC3
TPR_15
TPR-S
BTAD
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
100158547
NCBI-ProteinID:
NP_001121453
Xenbase:
XB-GENE-5929177
UniProt:
B2GUB6
LinkDB
All DBs
Position
1:177196868..177250374
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAILKNARDAIRNKDYKEVLKQCKAVLKLEKNNYNAWVFIGLAASELEQPEQAQ
AAYRKAVEIEPDQLLAWQGLGNLYEKVNQKDFKEDLPNVYQKLLELYKSSDKQKWFEVCK
KLSDLYQQEKDYVRAAHTWHQLIKMKEDEGIKANELYPLWKRMTELLCEDVEKQDNETQE
LLLNAFERAIPCIEEIPSEEHQMFYQHYITCLSKLPLEEAKMKEICGNMITVYPSLIYPQ
KVLALHYIKSGDTTGEAICCYSRLLELDPLNGPGLIGMGIKALHGRNYVLASENLSKGLK
GLNCCPFAWCCLAQAQLKTHKYAEALVSCDQAIKDCMQDSLALQTIAQKDTALRLKAEAL
LEGSGSDNAEEALKALEQISNADNDPEICAIKGHAYLKKGSTDVASKISEELRLSHEHLA
DGHFLEGLIQYTQKNYSAAELSLQYALERNPENAVYQYYLGLTYWFMSKETRRDKTKAVT
QFLKAAKMDPFMSKAFYYLGHYYSQVVGDKSRARGCYKKAFEIDGSDGEAGAAAVDLSME
LEDMDVALAILTSVTERANAGSAKWAWLRRGLFYLRVGQHSKSVSDLHAALRADPKDSNC
WECLGEAYLSRGGYTTALKSFMKASELNPDSIYSVYKIASIKQILGTYKEAINEYQQIIR
KSGDYVPALKGLGECHLMLAKSAFSDFLDLKAVDAIEKALEFLARAIQHRPDLLCLWKLL
GDACTWVHAVTHSSVKVNVLGMLLGKDEERQLLSKPEVLALGGRCYGRALRIQSIANLWC
DLGINYYYQAQHMMGNDSSNASELLEKSQQCTKKAVMMESKNHLFWNALGVISCSKGIGN
NALAQHAFIKSIHCEQNNVIAWTNLGALYLVNGNIELSHQAFRVAQSLDPLYVRCWIGQA
LIAETVGSHETMDLFRHTTELNMHVEGAKGYGHWVCTTLQDKSNRNTELYRYNIVQMNAI
TAAHLALSKYTERIQNDWTAFEMLGYLNEHLNLKKQASECYRRAVFILQEKEDKESSNSA
LQHYGRSLCAVGQYQEAIQTYLSTPMSDFDDLTGIALAYFKKGLLQESMKAYKQALSVAK
SEQEKAHILTALAIIEYNRGELDSAKTLLFKCSVLKEPSIESLQSLCALGLAKCDVTLAT
AALNELLKHVKIKDIVYKRCLITSAIHVLQGRNVAAQRQACRDIHSHPGNPELWAFLSRL
VPQHVPRNAKGGVVAGTVAYTLNINQSKTSLLYAAVNELAAGTLLAEDRKKNALNALQRA
AHFFPDNPAVWASLMAACEAENTASSLSMKSNKKTDLSLNFLASVKSKTEGMKAVPTSYT
QALESWSLCQAICALKDQGRISVAEALCTKSIQTCPDQTPFFLLLRQIQCKQLQSQAQIS
EPVLEELKKTVLSNFTSYNAWHWLAEVYQSLGMMMDAEMCYRKSLQLASQQGNWNGKLSS
LLRLALLALKVCMAKIPDSRWPALLQEATSEVLKMTSCPLALLLQGILQFSTKGSRKTRQ
LLEKVVYQSDCSDTIAFVARWYLLRHLHAKNDDQLVEVLLDNARAHGDTRIIDLHKQLTQ
KS
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaagtgaaggctatactgaagaatgccagagatgcaatcagaaataaa
gactacaaagaggtcctcaaacaatgcaaggctgtgttaaagctggaaaagaataactac
aatgcttgggtattcattggcttggcggcatctgaactggagcaaccagaacaagcccag
gcagcttacagaaaagcagtagagattgaaccggaccaattacttgcttggcagggactt
ggaaatttatatgaaaaagtcaaccaaaaggactttaaggaagatttgccaaatgtgtac
caaaagcttctggagctgtacaaaagctctgacaagcaaaaatggtttgaagtttgcaaa
aagctttccgatctctatcagcaagaaaaggattatgtgcgggctgcacacacatggcat
cagctgatcaaaatgaaagaagatgagggcatcaaggcgaatgaactttatcctctctgg
aaaaggatgacagagcttttgtgtgaagatgtggaaaagcaggataatgagactcaggaa
ctgctgctgaatgcatttgaaagagctatcccctgtatagaagaaattccaagtgaggaa
caccagatgttctaccagcactatatcacatgcttgtctaagcttcctcttgaagaagcc
aaaatgaaggagatatgtggaaacatgatcactgtgtacccttctctcatatacccacaa
aaagtactcgccttacactacataaaatctggtgataccactggagaggctatatgttgc
tacagcaggcttctggaacttgatcctttgaatgggcctggacttattggaatggggatc
aaggcactgcatggcagaaattatgtgctggcttcagaaaacttgtccaaagggctgaaa
ggattgaactgctgcccttttgcttggtgttgcctggcacaggctcagctaaaaacacac
aagtatgcagaggctcttgtatcctgcgaccaagcaataaaagattgcatgcaagatagt
ttggcactccaaaccattgctcaaaaagacacagcccttcggttgaaggcagaagcatta
ttagaaggcagtggctcagacaatgcagaggaagcactaaaagcccttgagcagatttct
aatgcggataatgatccagaaatttgtgctattaaaggacacgcttatctaaagaaaggc
tccacagatgtagcttcaaagatttcagaagaacttcgactgtcacatgaacatttggct
gatggacattttctggaaggtctgattcaatatacacagaaaaactactctgccgcagaa
ctaagtttgcagtatgcccttgagagaaacccagaaaatgcagtgtatcagtattatctg
ggattgacttattggtttatgagcaaagagacaaggagagataaaacaaaagccgtgacc
cagtttttgaaggctgccaaaatggacccttttatgtctaaagcattttattatttggga
cattattacagtcaagtagttggtgataaaagccgagctcgcggctgctacaaaaaagct
ttcgaaattgatggctcggatggtgaagctggtgcagccgcagttgatctgagcatggaa
ctagaagatatggacgtggctttagctattttaacaagtgtgacagaaagagcaaatgca
ggatcagctaaatgggcctggcttcgaagaggtctgttttatttgagagttggtcagcat
tccaaatcagtgtctgacttgcatgctgccctgcgagcagatccaaaggattccaactgc
tgggagtgtttaggagaggcctatctgagcagaggagggtacacaacagccctaaaatcc
ttcatgaaagcgagtgaactaaaccctgactccatatacagcgtatataagatagcttcc
atcaaacaaatcctgggaacctacaaagaggcaatcaatgaatatcagcaaattataagg
aagtctggtgactatgttcctgcacttaaaggcctgggagagtgccatctgatgcttgcc
aaaagtgctttttcagacttcttggatttaaaggctgttgatgctatagaaaaagctctt
gaatttctggctagggctatccagcatcgccctgacttattgtgcctgtggaagctcctt
ggagatgcatgtacttgggtacatgctgtcacacattccagtgtcaaagtaaatgtcctg
ggtatgctgcttggtaaggatgaggaacggcaactcttaagcaaacctgaagttttggca
ctaggaggaaggtgttatggccgcgcattacggattcagtccatagcaaatctctggtgt
gaccttggcatcaattattattaccaggcccagcacatgatgggtaatgatagcagtaat
gccagtgagttattagaaaaatcccaacagtgtaccaagaaagctgtaatgatggaaagt
aaaaatcatctcttttggaatgcgcttggtgtgatctcttgttccaaaggtattggcaat
aatgctctggcacaacatgcattcatcaaatcaatccactgcgagcaaaataatgtgatt
gcttggacaaaccttggtgctttgtatttggtgaatggaaatattgagctaagccatcaa
gcattcagagttgcgcagtctcttgacccattatatgtaagatgctggattggtcaggct
ttaatagcagaaacagttgggagccatgaaaccatggatctattcagacatacaactgaa
ctcaatatgcatgttgagggagcaaaaggatatggccactgggtctgtacaacccttcaa
gataaaagcaacaggaatacagagctgtaccgctataacattgtgcagatgaacgctatc
accgctgctcatcttgctttaagcaagtatacagaaaggatccaaaatgattggactgct
tttgaaatgctgggatatttaaatgagcacctaaacctgaaaaagcaagcgagtgaatgt
taccgtagagcggtttttattctccaagagaaagaagacaaagaaagctctaactctgct
cttcaacattatggacgatcactctgcgctgtagggcagtaccaagaggccatccaaacc
tacttgtccacccctatgagcgactttgatgatctcaccggcattgctcttgcatacttc
aaaaagggacttttacaagaaagcatgaaagcttacaagcaggcgttatctgttgccaag
tcagagcaagagaaagcacatattctcactgccctggcaataattgaatacaatcgaggt
gaattagattcagccaagactctgcttttcaaatgctctgttttaaaggagccaagcatt
gaaagcctacagtcactgtgtgcactgggactggcaaaatgtgatgttactctggcaaca
gccgctctcaatgagcttctcaagcatgtcaagattaaagacattgtttacaaaaggtgc
ctcattacttctgccatacatgtcctgcaaggcagaaatgtggctgcgcagaggcaagcc
tgcagggatattcacagtcaccctggaaatccagagttgtgggcattcctctcaagactg
gttcctcagcacgtgcccagaaatgcaaagggtggagtggttgcaggaactgtggcttat
acactcaatattaaccaatcaaagacatcccttttatatgcagcagtaaatgaactggca
gccggaactctcctagctgaagatcggaagaaaaatgcccttaatgctttgcaaagagca
gctcatttcttcccagataacccagctgtttgggccagtttaatggctgcttgtgaggca
gagaatacagccagttctcttagcatgaagagtaacaagaaaactgacctgagtctgaat
ttcctggcctccgtgaaatccaagactgaaggtatgaaggctgttcctactagttacaca
caagcgctggagagctggtcgttgtgtcaggccatttgtgctttaaaggatcaaggacga
atttcagtagctgaagctctgtgcactaagagcatacaaacctgtccggaccagacacct
ttctttctgctgttaagacaaattcagtgcaaacaactccagtcccaagcacagatttct
gaacctgttctagaagaattgaagaaaacagtcctgtctaatttcacttcttacaatgcc
tggcattggctcgctgaggtgtatcagtccttggggatgatgatggatgctgagatgtgc
tacagaaaaagtttacaactggcatcgcagcaaggcaactggaacgggaaactctccagc
ctgctgcgactagccctccttgcactcaaggtttgcatggcaaagattcctgatagtcgt
tggccagcacttttacaggaggctactagtgaggtgctgaaaatgacatcttgtcctctt
gctcttctacttcagggaattctccaattcagtacaaaaggttcccggaaaacccggcag
ctgctggagaaagtggtgtatcagagtgactgcagtgacaccatagcatttgttgcccgc
tggtacctcctaaggcatctgcatgccaaaaatgatgatcagttagttgaggtgctgtta
gacaatgctagagcccacggagacaccagaataatagatctgcacaagcaactgacccaa
aagtcataa
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integrated database retrieval system
