Xenopus tropicalis (tropical clawed frog): 100485396
Help
Entry
100485396 CDS
T01011
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100485396 (znf827)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100485396 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_5
zf-H2C2_2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
100485396
NCBI-ProteinID:
XP_002938981
Xenbase:
XB-GENE-1033048
UniProt:
A0A8J0QQE1
LinkDB
All DBs
Position
1:58422207..58530843
Genome browser
AA seq
1318 aa
AA seq
DB search
MPRRKQEQPKRLPSHGARQEEVEGEASEEENWFGTNSETPSEASYGDIQENYKLSPDDRG
QESPTSPDTSLGSATPSLSTDLGILESEFFKDASQCKELLSTSASSMDEDEQIGAHKPLS
SNLRRLLEAGSVQLVTDAGTNGRDDSSLNTSTNLQFSPSSHHAKQLSVLARKLAEKQEHS
EQYGGVSTNRFIWSQDKWLHNSNNTCGLSPDSAILKLKAAANAVLQDQSQLRTGESLKFE
SFTSPFSSQSASSTLAALSKKVSERGMTAGQERHSPAGPFLSLASMTSSAALLKEVAARA
AGSILAEKKKPLMSEDPLTLPEENQEKVTSTQSLELLLLPSPKGRPSKPGNQAPEEEGGK
PFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGET
FQCQLCPFTSSRHFSLKLHMRCHQHFLRAEAKVKEEPNEADIKQAPFKNSLASQDEGCAS
PAQMTLLPETLNQINSIAVSALPIKEEPKDNGCPSVIPFNDRPNSNSSAMMKESLDFVGC
PSSLFSQDISVKMASDFLMKLSAANQKEPLTLTFKVKDEPEDEEPISSLSPQSLYGFNQE
SEGRLSSTPDEDSKPQETQPNLLTQDISMKAASELLMKLSAESCKDTQSVKIKEEPMEVD
IPDSSISPRQNIGYSTLLRQEKNEHLQKMPLCRVVPEGNLFSQDISVKMASELLFKLSEK
VSKEHNHKSNVIRTTSPFFSEEKCRQSPFTSNSKDIVKNEAFPQGRPDSEPMGLDTSSGI
PTWKLSEQLFPCDVCGKVFGRQQTLSRHLLLHTEERKYKCHLCSYAAKCRANLNQHLTVH
AVKLVSTDTEDIVSAVISETSEKKKTPYFYSCHVCGFETELNVQFVSHMSLHVDKEQWMY
SICCSTCDFVTMEESDMRTHISTKHSGEDRKTPSESVSPSSSSLSTLSDSANSKEDSDTP
LRNQTSNSLLVISVVPGSQPFVSNEEKSDKGFECVFCNFVCKTKTMFERHLQIHLITRMY
ECDVCHKFMKTPEQLTEHKKCHTVPTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKCRI
CKTVKANQLELEMHVRGHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCSYS
CKRKDNLNLHKKLKHSPRQTFSCEECLFKTTHPFVFSRHVKKHQNGELMEEEKKLPTPAP
KEAKPLLTVNDPRSLLSPLSVMSASQALQTVAMSAAQSRGADTHLALKAFAVNGTSSSFD
RYQNSEVAHLIPLTMLFPKNHFDVTFHPPRPQTAPPGVSTPKHSFLAYLGLTERAKTV
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaggaaacaggagcagcccaaacgcctgccttcacatggtgctcgacaagag
gaagtggaaggagaagcaagtgaggaagagaactggtttggaacaaattctgaaacccca
tcagaagcttcctatggagatattcaagagaattataaactatcacctgatgacagagga
caagaatcacccacatctcctgatacatccctaggaagtgcaaccccaagtttaagcact
gatttgggaattctggaaagtgagttttttaaggatgcctcacaatgtaaggagctgttg
tcaacgtctgcatcctccatggatgaggatgagcaaattggcgcacacaagccattaagc
agtaatctgagacgtctcctagaggctggttcagtgcagcttgtaacagacgctggtaca
aatggcagagatgactcttcacttaatacttctacaaacctccaattttctccgtcttct
caccatgcaaagcagctgagtgtccttgcaagaaagcttgctgaaaagcaggagcacagt
gagcagtatggaggggtttcaaccaacaggtttatatggagtcaggacaaatggctacat
aattcaaataacacatgtggcctgtcaccggactctgctatcctaaaactcaaagctgct
gctaatgctgttcttcaagatcagtcacagttaagaactggtgaaagtctaaagtttgaa
tcatttacttctccatttagttctcagtctgctagctccactttagcagcattatcaaag
aaagttagtgaaaggggcatgacagcaggtcaggagcgtcattctccagctggtccattt
ctttccttggcttccatgacctcttctgctgccttgcttaaggaagttgctgcacgggct
gctggtagtatacttgctgagaaaaaaaagccccttatgtcagaagaccctttaacactg
cctgaagaaaatcaagaaaaggtaacttcaacacaatctttggaactgttgttactccct
tcacctaaaggaaggccatctaaacctggaaatcaagctccagaggaggaaggcggaaaa
ccatttcagtgtcctatttgtggcttggtaataaaaaggaagagttactggaaaaggcac
atggtgattcacacaggtttaaaaagtcatcagtgtccactatgtccatttcgttgtgct
cgcaaggacaatcttaaatcacacatgaaggtccaccagcaccaggaccgaggggaaacc
tttcagtgccaactctgccctttcacctcatctcgccattttagcctaaaactccatatg
cgctgccaccagcacttcctgcgggcagaggccaaagtgaaagaagaacctaacgaagct
gacattaaacaagcaccttttaaaaattccttggcaagtcaggatgaaggatgtgcttca
cctgcacaaatgactctacttccagagaccttaaaccagattaactctatagctgtcagt
gcactacctattaaagaggaacctaaagacaatggctgcccttctgtcattccttttaat
gacagacctaacagtaacagcagcgcaatgatgaaagaatctttggattttgtaggttgc
ccttcatcccttttcagccaagacatctctgtaaagatggcatcagattttctgatgaag
ttatcagctgcaaatcagaaggagcccctcactcttacttttaaagtgaaagatgaaccc
gaggatgaagagcctattagctccctatccccacaatccttgtacggttttaaccaggaa
tcagaaggtcggctttccagcaccccagatgaagacagcaagccacaagaaacacagcca
aacctgctcactcaagatatctccatgaaagcagcatctgagctccttatgaaactctca
gctgaaagctgtaaggacacgcagtctgtgaagattaaagaggaacccatggaggttgac
atccctgactcttccatctccccaagacagaacattggttacagcactttattaaggcaa
gaaaaaaatgagcacttgcagaagatgccattgtgtcgagttgttcctgaagggaacctg
ttcagccaagatatatctgtaaagatggcttcagaacttctcttcaaactgtcagaaaaa
gttagcaaagagcataatcacaagtcaaatgttatccgaacaaccagcccctttttttca
gaagaaaaatgcagacaatcaccattcacctccaactcaaaagacattgtaaaaaatgaa
gcttttccacaaggaagaccagattctgaaccgatgggacttgacactagcagcggtata
ccgacatggaaactcagtgaacaactctttccatgtgatgtctgtgggaaagtgtttggt
cgacagcagactctgtctcgacacctcttgcttcacacagaagaaagaaaatacaaatgt
catttgtgctcatatgctgcaaagtgccgcgctaacctgaatcaacatctgactgtccat
gcagtgaagctggtgagcacggacaccgaagacattgtgagtgctgttatatctgaaacc
agtgagaaaaagaagaccccttatttctacagttgtcacgtctgtggctttgagacagag
ttgaatgttcagtttgtgagccacatgtcccttcacgtagacaaagagcagtggatgtac
tctatctgttgcagcacctgtgactttgtcaccatggaggaatctgatatgaggacacac
atcagcactaaacactcaggagaagatagaaagacccctagtgaatcagtaagcccctct
tcctcgtccttgtctacactcagtgattcagccaacagtaaagaagattcagacacccca
ctgagaaaccagacttcaaacagtttgttggttatttccgtagtgcctggctcccagccc
tttgtcagcaatgaagagaagtcagataaaggatttgagtgtgttttctgcaattttgtc
tgcaaaacgaaaacaatgtttgagcgtcaccttcagatccacctgatcacccggatgtat
gaatgtgacgtgtgccataagttcatgaagacaccagagcagctgacagaacacaagaaa
tgccacacagtccccaccggtgggctcaagtgcccattctgcatttactctacaaaccgc
cccgcagccatggagtgtcacctaaagacacactacaagatggagtacaagtgtcgaatc
tgcaagacagtgaaagcaaaccagctggagcttgaaatgcacgtccgggggcaccgtctt
gggaaccattacaagtgtgaccagtgcggctatctctcaaagacagctaacaagctgatt
gagcacgtccgtgtccacacaggagagcgtccctttcactgtgaccagtgcagctacagc
tgcaaacgcaaagacaatctcaacttgcacaagaagctcaagcactctccacgccagacc
ttcagctgcgaagagtgcctgtttaagaccacgcacccatttgtcttcagtcgccatgtc
aaaaagcaccagaatggtgaattaatggaagaagagaagaaactcccaactccagctcca
aaagaggctaaacccttgctaactgttaatgaccctaggagccttttatcgcctctctct
gtcatgtctgcttcccaggctctacaaacagtggccatgtctgctgcccagagccggggg
gctgatacacatttagcacttaaagcctttgcagtaaacggtacctcatcaagctttgat
aggtaccagaactccgaggttgctcatctcattcccttaactatgctttttcccaagaac
catttcgacgtcacattccatccaccccgacctcagacggcaccaccaggtgtctccaca
cctaagcactccttccttgcttaccttggactaacagaaagggcaaaaactgtttaa
DBGET
integrated database retrieval system
