Xenopus tropicalis (tropical clawed frog): 100485625
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Entry
100485625 CDS
T01011
Symbol
septin4
Name
(RefSeq) septin-4 isoform X1
KO
K16943
septin 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100485625 (septin4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100485625 (septin4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100485625 (septin4)
04812 Cytoskeleton proteins [BR:
xtr04812
]
100485625 (septin4)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
100485625 (septin4)
Cilium and associated proteins [BR:
xtr03037
]
Motile cilia and associated proteins
Sperm associated proteins
100485625 (septin4)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
100485625 (septin4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AAA_16
AIG1
Ras
ABC_tran
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
100485625
NCBI-ProteinID:
XP_002933653
Xenbase:
XB-GENE-983580
UniProt:
A0A8J0QME6
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Position
2:complement(41926264..41970586)
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AA seq
634 aa
AA seq
DB search
MERSSSEETYSEAEDESQFGHFLRNDSEAELAGIIKGVGFDGSLHIQENNHSDQDQEKED
WLHNRQHQECGRIYNKQLEQERQSRRGQQQQEEESLWKEQQDEEILLRENQGEYLIKRQH
EGDVRLHRKQLDEEERLRREHQEEKIRGQQYEEERLYREHQQDAWLRREQQEQKLRKQQL
EQIETLQRDHLRLPKAQYEDKRVLKEKVSQLDYDILPNMIRHIKDDTEQEDGWEDEDSGL
TMLPTKLCCPQALTPLSPSRPKSPWGRFDPYDSFEEDREYVGFATLPNQMHRKYVKKGFE
FTLMVAGESGLGKSTLINSLFLTDLYRDRHILSPEERVTQTVEIVKQTVDIQEKGVRLRL
TVVDTPGYGDAINNEICWKPVADYIDQQFEQYFRDESGLNRRNLQDTRVHCCLYFLSPLG
HGMRPMDIEFLQALQDKVNIVPILGKADSLTPTELQQKKQRIRDEIDKYGIRIYQFPECD
PDEDEDFKQQDIELKKSIPFAVIGSNTIIEVNGRRVRGRMYPWGVVEVENEEHCDFIKLR
TMLIRTHMQDLKDVTRETHYENYRAQCIQNLTQRVVRERNRNKLTRESGTDFPIPSMPPS
PDHETQRLIREKDEELRRMHEVLQKMQRQMKDSQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagcagcagtgaggagacctatagtgaggcagaggatgagagtcagttcgga
catttcctacgtaatgactctgaggcggagttggcaggcataattaagggtgtcgggttt
gatggtagcttacacatccaagagaataatcacagtgatcaggaccaagagaaagaagac
tggctccataacaggcagcaccaggaatgtggtagaatatacaacaagcagttggagcaa
gaaaggcagagcagaagaggccaacagcagcaggaggaagagagtctatggaaagaacag
caggatgaagaaatactcttgagagaaaaccagggagaatatctcattaagagacagcat
gaaggggatgtaaggctacacagaaaacagcttgatgaggaggaaaggctccgcagagag
caccaggaagaaaagatccgtgggcaacagtatgaggaggagaggctttacagagagcac
cagcaggatgcatggcttcgacgtgagcagcaagagcagaaactacgcaaacagcaattg
gagcaaattgaaaccctacaaagagatcatctaagactccccaaagcacagtacgaagac
aagagggtccttaaggaaaaggtctcacaactggattatgatatcttgcctaatatgatc
aggcacattaaagatgacactgaacaggaggatggctgggaagatgaagattctggttta
acaatgctgcctacaaagttgtgttgcccacaagcactgactccactcagcccttctaga
cccaagagtccatggggcaggtttgatccatatgactcctttgaggaggacagagaatat
gtgggatttgccacccttcccaaccagatgcacagaaaatatgtgaagaaaggctttgaa
tttactctcatggttgcaggagaatctggtctaggaaagtcaacattaattaacagtttg
ttcttaacggatctatatcgagatcgtcacatactaagcccagaagaacgtgtcacacag
acagttgagatagtgaagcagacagtggacatacaggagaaaggtgtgcgactgcgcctg
acggtagtggatacaccaggctatggggatgctataaataatgaaatatgttggaaacca
gtggcagattatattgaccagcaatttgagcagtatttcagggatgagagtggattaaac
cgcaggaatcttcaggacacacgtgtgcactgctgtctctatttcctgtcaccgttaggg
catgggatgagacccatggacatagagtttctgcaagcgctacaggacaaagtaaatatt
gtgcccatcctggggaaagcagacagcctgacacctacagagctgcaacaaaagaagcag
aggattcgagatgaaatagataaatacggaattcgaatttaccagtttccagaatgtgac
cctgatgaagatgaagactttaagcagcaggatatagaactgaaaaaaagcattccattt
gccgtcattggatccaacaccatcatagaggttaatgggaggcgtgtaagaggccgtatg
tacccctggggggttgttgaagtggagaatgaagaacactgtgactttataaagctgcgt
actatgctgattcgcactcacatgcaggatttgaaggatgttacaagagaaactcactat
gagaactaccgtgcccagtgcatccagaacctgacacagcgagtggtgagggagcggaac
cgcaataagctgaccagagagagtgggacagacttcccaatcccaagcatgcctccatca
ccagatcatgaaacccaaagacttatccgagaaaaagatgaggagctgcggcgaatgcac
gaggttctgcagaagatgcagaggcagatgaaggactcacaataa
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