KEGG   Xenopus tropicalis (tropical clawed frog): 100490019
Entry
100490019         CDS       T01011                                 
Symbol
mmp13l
Name
(RefSeq) collagenase 3
  KO
K07994  matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xtr01002]
    100490019 (mmp13l)
Peptidases and inhibitors [BR:xtr01002]
 Metallo peptidases
  Family M10
   100490019 (mmp13l)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_4 DUF4953 Reprolysin_5 Peptidase_M66
Other DBs
NCBI-GeneID: 100490019
NCBI-ProteinID: XP_002934971
Xenbase: XB-GENE-481558
UniProt: F6SRT1
LinkDB
Position
2:161584669..161592069
AA seq 472 aa
MAPSLLSVLVLSLSFAYCLSAPVPQDEDSEMTPGDLQLAEHYLNRLYSSSSNLAGMLRMR
NVKSIETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDIGQYNFFPRKLKWPRNNLT
YRIVNYTPDLSTSEVDRAIKKALKVWSDVTPLNFTRLRTGTADIMVSFGKKEHGDYYPFD
GPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNKGYNLFVVAAHEFGHALGLDHSRDPGSL
MFPVYTYTETSQFLLPDDDVQGIQALYGPGNRDPHPKHPKTPEKCDPELSIDAITELRGE
KMIFKDRFFWRVHPQMTDAELVLIKSFWPELPNKIDAAYEHAAKDVIYIFRGKKFWALNG
YDIVEDYPKKLHELGFPKTLKAIDAAVYNKAIGKTLFFAGDSYWSFNEETRTMDKGFPRL
ISEDFPGIGEKVDAAYQRNGYIYFFSGALQFEYSTWSQRVTRILKTNFVLMC
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcaccttcactcttgtcagtacttgtcctatctctaagctttgcttattgcctctca
gcccctgttccacaggatgaagactctgagatgacaccaggagacctacagttggctgag
cattacctaaaccggctttacagttcctcgtctaaccttgctggcatgctgaggatgagg
aatgtgaagagcatagagaccaagctgaaggagatgcagtccttctttggtttggaggtg
actggcaaactcaacgaagatactctggacatcatgaaacagccaagatgtggtgtccct
gatattgggcaatacaatttcttcccaagaaaactgaaatggccaagaaataacctgaca
tacaggattgtgaactacaccccagatttatccaccagtgaagttgatagagccatcaaa
aaagcactgaaggtatggagtgatgtcacgccgctgaacttcactaggctccgcactggc
accgctgacatcatggtctcttttggcaaaaaagaacatggagactactatccatttgat
ggtccagacggcttgctagctcatgcctttccacctggggaaaagattgggggggacact
cactttgacgatgatgagatgttctcaacggacaataaaggatacaatctctttgttgtt
gctgctcatgagtttggccatgcgttggggttggatcattctagggatcctggttctctg
atgttcccagtttacacctacacagaaacaagtcaattcttacttcccgacgatgacgtg
caagggattcaggctctgtatggtcctggtaatagagatccacatccaaaacaccctaaa
actccagagaaatgtgatcccgagctaagcattgatgccatcacggaactaagaggggaa
aagatgatctttaaagacaggttcttctggcgggttcacccccagatgacagatgcagaa
cttgtactgatcaagtccttttggcctgaacttcccaataagattgatgctgcctatgaa
cacgcagccaaggatgtgatctacatatttagaggtaaaaagttttgggctctcaatgga
tatgatatagtggaagattatcccaaaaaactccatgagcttggctttccaaagacacta
aaggctatcgatgcagctgtgtataataaagccattgggaaaactctcttcttcgctggc
gacagttactggagttttaatgaggagaccaggaccatggataagggcttcccaagactc
atctcagaggacttcccaggaatcggcgagaaagtagacgctgcatatcagagaaatggc
tacatctatttcttcagcggagcactgcaatttgaatacagcacctggagccagagagta
acacgcatcctgaaaaccaattttgtcctgatgtgctga

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