Xenopus tropicalis (tropical clawed frog): 100492135
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Entry
100492135 CDS
T01011
Symbol
cacna1a
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100492135 (cacna1a)
04020 Calcium signaling pathway
100492135 (cacna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100492135 (cacna1a)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100492135 (cacna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF4034
Motif
Other DBs
NCBI-GeneID:
100492135
NCBI-ProteinID:
XP_031755311
Xenbase:
XB-GENE-1013831
UniProt:
A0A8J1JF79
LinkDB
All DBs
Position
3:complement(140646672..140778677)
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AA seq
2302 aa
AA seq
DB search
MILATIIANCIVLAMEQHLPVGDKTPMSERLDDTEPYFIGIFCFETGIKIIALGFAFHKG
SYLRNGWNIMDFVVVLSGIVASTGPEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFFAILIFAIIGLDFYIGKFHTSCYDMAGEDIREEVLCGNDSSSRRCPEN
TQCLSKWEGPNNGITQFDNILFAILTVFQCITMEGWTDILYYSNDVFGSAFNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYMEWISKAEVILA
EDDSDIEQRLPYDGALRRPTIKKNKTELLNAEEGEEAIGDIASVGSPFARASIKSAKMEN
SSYMHKKERRIRFLIRRMVKTQAFYWVVLGLVALNTLCVAIVHYGQDDRLSEFLYYAEFI
FLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVITGSIFEVVWAMVKPGTSFGISVLRAL
RLLRIFKVTKYWASLRNLVISLLSSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDEK
TPATNFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKTGMVFSIYFIILTLFGNYTL
LNVFLAIAVDNLANAQELTKDEQEEEEAANQKLAMQKAKEVAEVSPLSATNMSIAAKEQQ
KNQKTSMSVWEQRTNEIRRQNLMNSREALYSELDPEERWKLSFMRPDVKTHLDRPLVVDP
QENRNNNTNKTRPGEGRNPIEQRLSQQRAEDYLRKQARFQERGGRGYDMGQEPGRRPRIK
EQDIIRDGQDLGMQDRTGEMDGGIRPPQDPHRRHRGGGSKESRSGSPLPRGDGDHRRHRP
HRRTGEDNEDAGGGGGGGGRGGGGGGDRRPRHGRDGMRVREGGGGESEGPEGERRRRHRH
AAQSTYESDAKRDDRERRHRRRKEPTAPTPGSGGPNLSTTRPIQDRSRQENQNQQPENMD
NIRNTKLVTSEPPAGGGVGGLNHSPAKIGNHTNCANNNSVPTGNATPRRTPHPTNSGPPP
SAPDPSHTFSNPTETAKGTKTTEHTTVDIPPPFPPPVENAIGQANKIVAVSPLPKKDDEK
KEEEEDDDDGEKGPKPMPPYSSMFILSTTNPLRRLCHYIVTMRYFEMCILMVIAMSSIAL
AAEDPVQPDAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLILHQGAYFRDLWNFLDFIVV
CGALVAFAFSSNQRGGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNV
LNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFQRDCRGEYLVYDKSEVKAQKREWK
KWPFHYDNVLWALLTLFTVSTGEGWPDVLRHSVDATYEDQGPRPGFRMEMSIFYVVYFVV
FPFFFVNIFVALIIITFQEQGDKIMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQY
RMWQFVVSPPFEYTIMALIALNTIVLMMKFHGSSNTYENVLKTFNMVFTSLFSLECLLKI
MAFGAPNYFRDAWNIFDFVTVLGSITDIVVTELWDSIINLSFLRLFRAARLIKLLRQGYT
IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDEEDDDTAITEHNNFRNF
FQALMLLFRSATGEAWHEIMLSCLSGRPCDVGSGLKEKECGSEFAYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMKYTDLYEMLRLISPP
LGLGKKCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDSQ
LRKEMMAIWPNMSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKRLQALQEEQN
RTPLMFQRMEPPSPTQDGPLGINALPSSQAGEMGLPEGGMKESQSWMTQRAQQMFQKTGT
WSPERARTQENTNSWPNSQQSVEMSDMGRDGYSDSEQYLVMEGHGRAASMPRLPADNQQR
RKTRTRGSNLSTITDGSPMKRSASMLGHSQSKGIRLDEYSLERVTPEEGPRHGHQRRRER
GHRVSDRSLTRYVDLESGLGTELSTTTQSCDLPTEERGRTRDRKHHHHHHHHHHHHHHHP
STERERLEYGRPSSRSPSTGRDYAPHRQGSSSVDGSPVPSTSGASTPRRGRRQLPQLPTT
PRPRVTYSPVVRRPASVCSPQQQSLCRMTTPIQRRYPQTENRPSSNERRSVNNDSPRSHR
HTRGHCTEVPRAGCRHSGPYRDSSFEDPHPCDQRSSRTAESGGVPPLSPRGRRLPNGYSH
GTPRSTKSRHERYSESEEDDWC
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgattttagcaactatcatagctaactgcatcgtactggctatggagcaacacttaccc
gtgggggacaagacaccaatgtcggaacgtctggatgacactgaaccctattttattgga
attttctgttttgagacggggattaaaatcatcgccttgggatttgcctttcacaaagga
tcctatttgcggaatggctggaatatcatggattttgtggttgtgttatcaggcattgtg
gcatctacaggcccagagtttgatctgaggaccctccgagctgtacgtgtcctgcgaccc
ctcaaactggtttctgggattccaagtttacaagttgtgctgaagtcgatcatgaaagcc
atgatccctctgctccagattggactgctgctcttctttgctatcctcatctttgccatc
attggcctcgacttctacattggcaaattccacacatcctgttatgacatggctggagaa
gatataagagaggaggttctctgcggcaatgacagctcctctcgtcgctgccctgaaaat
acgcagtgcctgagcaaatgggagggtcctaataatggaatcacgcagtttgacaacatt
ctgtttgcaattctcacagtattccagtgtataactatggagggatggacagatatcctg
tattatagtaacgatgtgttcggcagcgcattcaactggctttatttcattcccctcatc
atcattggctccttcttcatgctaaatcttgtccttggtgtcctttctggggagtttgcc
aaagagagggagcgcgtggagaaccgccgagccttcatgaaactgaggaggcagcagcag
attgagagggaactgaatggctatatggaatggatctctaaagcagaagtcatccttgct
gaagatgatagtgatattgagcagagacttccttatgatggagcccttcggagacccact
atcaagaagaacaagacagaactgctgaatgctgaggagggggaagaggccattggggac
atagcttctgtgggctccccttttgcacgtgccagcattaaaagtgccaagatggagaac
tcatcatacatgcacaagaaggagcgtcgcatccgtttcctgattcgacgcatggtgaag
actcaggccttttactgggttgttctgggtcttgtggcactgaacacgctgtgcgtggca
attgtgcactatggccaagatgaccggctttccgaatttctctattatgcagaattcata
ttccttgggctctttatgtccgaaatgtttataaaaatgtacggtcttgggaccaggcct
tattttcattcatcgtttaactgctttgactgtgccgtaatcaccggaagcatctttgag
gtggtttgggcaatggtgaagcctggaacctcctttgggatcagcgtcttaagagccctt
cgcttgctgcgtatcttcaaagttacaaagtattgggcttctctccgcaatttggtgatc
tccctactcagctcaatgaagtccattatcagtctgctcttcctgctcttcctttttatt
gttgtctttgccttattggggatgcagctgtttggcgggcagttcaattttgacgagaaa
actcctgctaccaatttcgacacctttcctgcagcaataatgacagtttttcagatctta
actggggaagactggaatgcagtgatgtatgatggcatcaagtctcagggtggagtgaaa
actggcatggtattttccatctatttcatcatccttacgctttttgggaactacactctg
ctgaatgtcttcttggccatcgctgtggacaatcttgctaatgctcaggagctgacgaag
gatgaacaagaagaagaagaggcagccaatcagaagctggccatgcaaaaagcaaaagaa
gtagcagaggtcagccccttgtctgctaccaacatgtccattgctgcaaaagagcaacag
aagaaccaaaagacttctatgtctgtttgggagcagcgcacaaatgagatccgccgacaa
aacttgatgaatagcagggaggctttatacagtgagcttgatccagaggagcgttggaag
ctctccttcatgaggccggatgtcaagactcatttggatcggccactggtggttgacccc
caggagaaccgcaacaacaacaccaataaaacccgtcctggtgagggaaggaaccccata
gaacaacgcttatcccaacagcgagcagaagactatttaagaaaacaagcacgatttcag
gaacgtggtgggaggggatatgacatgggccaagaacctgggcgccgtcctcgaatcaag
gagcaggatataatacgggatgggcaggacctagggatgcaagacaggacaggagaaatg
gatggagggattcgtcccccacaggatccacaccggcgacaccggggtggtgggagcaag
gaaagtcgaagtggttcacctctgcctaggggggatggagaccacagaaggcacaggcca
catcgcagaactggagaggacaatgaggatgcgggtggtggtggtggtggagggggcagg
ggcggaggtggtgggggagacaggagacctcgtcatggtagggatggaatgagggtacga
gaagggggtggaggagaaagtgagggtcctgagggtgagaggaggaggaggcatcgacac
gcggcacagtccacttacgagagcgatgccaagagggatgacagagagaggaggcatcgc
agaaggaaggaacccacagccccaaccccaggctctggtgggccaaatctttccacaacg
cgacctattcaagaccgttcccggcaggagaaccagaaccagcagcctgaaaacatggat
aacattcgtaacaccaaacttgtgaccagtgagccgcccgcaggtggtggtgtgggtggt
ctcaatcacagcccagccaaaatcggtaaccacaccaattgtgccaacaacaacagtgtg
cccactggaaatgccacccccagacggacgcctcatccaaccaattcaggccctcctcct
tctgctcctgaccccagccacacctttagcaaccctacagagactgccaaggggacgaaa
accacagaacacacaactgtggatattccacccccattccctccacctgtggagaatgct
attgggcaagccaataagattgttgcagtctccccgcttcctaaaaaagacgatgagaaa
aaagaagaagaggaggatgatgatgatggagaaaagggccctaagccgatgcccccctac
agctccatgtttattttgtctactactaaccctcttcggcgactgtgccattacatagtc
actatgcgatactttgaaatgtgcatcttgatggtgatcgcaatgagcagtatagccctc
gctgctgaagacccagtgcagccagatgcccccaggaataacgtcttgcgttattttgac
tacgtctttacgggagtcttcacttttgagatggttatcaagatggtcgatctgggcctc
attctacatcagggagcctacttccgggatctgtggaactttttagatttcatcgtcgtc
tgcggtgctctagtggccttcgccttttcgagcaatcagcgaggtggaagcaaaggaaag
gatataagtaccatcaagtcactgcgtgttctgcgtgtcctgcgtcctctgaaaacaatc
aaacggcttcccaagctaaaggccgtgttcgactgcgtagtcaactctctgaagaacgtt
ctgaacattctcattgtctacatgctcttcatgttcatcttcgctgttgtagccgtccag
cttttcaaggggaagttcttttattgtacagatgagtccaaggaattccagagagactgc
aggggagaatacctggtctatgacaaaagtgaagttaaagcacagaaacgagagtggaag
aaatggccgttccattatgacaatgtgctatgggcacttctcaccctctttactgtatct
acaggggaaggttggccagatgtgctcagacattctgtggatgccacctatgaggatcag
ggtcccaggcctggttttcggatggagatgtctatattttatgtggtctactttgtggtc
ttccctttcttctttgtcaacatctttgtggccttgattatcataactttccaggagcag
ggtgacaaaataatggaggagtacagtttggaaaagaatgagagagcttgcatagacttt
gctatcagtgccaagccgctgacgcgccatatgccgcagaacaagcagagctttcagtat
cgcatgtggcagtttgtggtgtctcccccctttgaatacaccatcatggctctcatcgca
ctcaatacgattgtgttaatgatgaagttccacggatcttctaatacatatgaaaatgtg
ctgaaaacattcaacatggtcttcacctccctcttctctcttgaatgccttctcaaaata
atggctttcggtgctccgaattatttccgggacgcctggaacatctttgattttgtgacg
gttcttgggagcatcacggatattgtagtgactgagctctgggacagcatcatcaacctc
agcttcctccgtctgtttcgagctgcccgacttattaaactcctgcggcagggatacacc
attcgtattctactgtggaccttcgtccagtccttcaaggctctaccctacgtctgcctc
ctgatcgctatgctgttctttatttatgccatcatcggcatgcaggtgttcggtaacatt
gccttggatgaagaagacgacgacacagctataaccgagcacaataatttccgcaacttt
ttccaagctcttatgcttctcttccgcagtgccacgggcgaggcttggcatgaaatcatg
ctgtcctgtttgagtgggagaccatgtgacgtcgggtccggattaaaggagaaggagtgc
ggcagtgaatttgcttatttttactttgtgtcgttcatattcctctgttccttcctgatg
ttaaacctgtttgttgctgtcatcatggacaactttgaatatctgacccgtgattcatcc
atcttgggccctcatcaccttgatgaatacgtgcgagtatgggcggagtatgatcctgcc
gcttggggtcgcatgaaatacacagacttgtatgagatgctcagacttatctcgcctccc
ttgggtctggggaagaaatgccctgctcgagttgcttataagaggttactccgaatggat
cttcctgttgctgacgataacactgtgcatttcaactctactctgatggctctgattaga
actgcgttggacatcaagattgccaagggtggggcagacaagcagcagatggacagtcaa
ctcagaaaggaaatgatggctatttggccaaacatgtcccagaaaacactggacctattg
gtgaccccacataagtctactgacctcactgttggaaagatctatgctgccatgatgatt
atggagtattacaggcagagcaaagcaaaaaggcttcaggctctgcaggaggaacagaac
cgcacccctctcatgttccagcgaatggaaccaccatcgcccacacaggatggaccctta
ggaatcaatgctttgccgtcctcccaagctggagaaatggggctgcctgaagggggcatg
aaggagagccagtcttggatgacccaacgggcccagcagatgtttcagaaaacagggacc
tggagcccagagagggcgcgcacacaggaaaataccaacagctggccaaattcccaacag
tctgtagagatgagtgacatgggtcgggacggttactcagacagcgagcagtacctggtc
atggagggacatggaagagccgcttcaatgccacggcttccagctgataaccagcagcga
aggaaaacccgaaccagagggagtaatctcagtactattacggacgggagtcctatgaaa
cgttccgcctccatgctcggccactcccagtctaaaggcatcagattggatgagtattca
ttagagagggttacacctgaggaaggacctcgccatgggcaccaacgcaggagggagagg
ggacacagggtctctgacagatccctcacccgatatgtggatctggagtcaggattgggt
acagagctcagcactacaacacagtcatgtgatctccccactgaagagcgtggacgcact
cgagatcggaagcaccaccatcaccaccaccaccatcatcatcaccatcatcaccacccc
agcactgaacgggagagattagagtacggaaggccaagctctcgctcccccagcacaggg
cgagattatgctccacacagacagggcagtagttcagtggatggcagccccgtgccctca
acctctggggccagcacaccccgcagaggaaggcgacagctgccccagctgccaacaact
cccaggccacgagttacttattctccagtggtccgccggcctgccagcgtttgctctccc
cagcagcagtccttgtgcagaatgaccacccctatccaacggagatatccccagactgag
aaccgtccaagcagcaatgaaagacggtccgttaacaatgattccccccgatcccatcgt
cacacaagaggacactgcacggaagtcccccgcgctggatgcaggcacagcggcccttat
cgagattcctcttttgaggaccctcatccctgcgatcagcgctcctccaggactgccgag
tctgggggggtaccccctctctcaccgcgcgggcgcaggttgcccaatggttactctcat
gggaccccgcgatccacaaaatcacgtcatgaacgttacagtgagagtgaggaggatgac
tggtgctaa
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integrated database retrieval system
