Xenopus tropicalis (tropical clawed frog): 100492962
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Entry
100492962 CDS
T01011
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X2
KO
K14301
nuclear pore complex protein Nup107
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100492962 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100492962 (nup107)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100492962 (nup107)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100492962 (nup107)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100492962 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
100492962
NCBI-ProteinID:
XP_002938554
Xenbase:
XB-GENE-1006597
UniProt:
A0A8J0QPV6
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All DBs
Position
3:58822726..58849617
Genome browser
AA seq
916 aa
AA seq
DB search
MDMLSPVVREAEVSRAARRQSSNRRNPADESWSNATPARGPLSRTTGQTLFRQHMTPQTW
NSSRPPDVSAILGTVGRSPRLVQTPGRLANMSMMSNPDDSVWTTTFSPGRTGMYTTLDSP
SFTEDITLSAVMLQEEDPGEAATMSMYPDFLKSFLEHPSSAVFELIEHYEATCNTQITLL
KKIVKRVTPGQQKFSKTASILWLLQQEMVTWRLIAALYRDRIQFALEEENMFEIAAPNAS
EKTVVDKLFQRDALVRQSQLVVDWLESIAKDEVGDFSDNIEYYAKSVYWENTLHTLKQRS
MSSLGSGRPLVSELDPDAPIRQKLPLDDLDREDDIRLLKYLFTLIRAGMTDEAQRLCKRC
GQAWRAATLEGWKLYHDANINGGTELQAVEGNPYRCVWKTCCWRMAEDEQFSKYERAIYA
TLSGNLKQLLPVCESWEDTVWAHFKVMVDSLVEQEIRASVISINEANELPREYLEANWTL
ERVFEELQATDKRRVLEENREHYHIIQKFVILADVDGLMDEFSEWLANEKKLLLGHLLRF
MTHLILFFRTLGLQTKEEVSVEVLKTYIQRLINEKQIELIAFYVSHLPQDLAISQYAVFL
ENVTDPEQRQRCLELAKEAGLDVASITKTVVENTRKKDAGEFAHHNLAPALDSGTSEEDR
AKINVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHEAAKEVFAKIPQDSIAEIYTQWEE
QAMDSALPAEDDNAIREHLCIRAYLEAHEAFNEWFKHINSPPQKPTLVGQASFTEKVAYE
HKEKKYEMDFGIWKGHLDALTTEVKEKIYNVLLFVDGGWMVDVREDTEEDPERSHQMNLL
RTLCLPMMCFLLHTVLHNTKQYKDCLRLADIISSEHQKLYMVFSKTEMRNLLQKLRESSL
MLLDQQLDPLGYEIQP
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctttcgccggtagtgcgggaggcagaggtttctagagcagctcgccgccaa
agctccaacaggaggaatcctgctgatgagagctggagcaatgcaacaccagcaagaggc
ccattatctcgcacaacaggacaaacactatttcgacagcacatgacgccacaaacctgg
aattcttcaaggccaccagatgtttcggcaatactgggcactgtagggcgatcacctcgc
ttggtacagactcctgggcgtttggcaaacatgtctatgatgtccaatccggatgacagt
gtttggacaacaactttttctcctgggcgaactggcatgtatactactctggattctcct
agttttactgaagatattacactaagtgcagtaatgcttcaggaggaggatcctggggaa
gcagcaacaatgagcatgtatccagattttctcaaatcgtttttggaacacccttccagt
gctgtattcgaacttatagagcattatgaagctacgtgcaatacccagattactttactt
aaaaaaattgttaaaagagtaacgccagggcaacagaagttttcgaaaactgccagcatc
ttatggcttctccagcaagaaatggtaacgtggaggcttattgcagcactctacagggat
cgtatacagtttgcattagaagaggaaaatatgtttgaaattgctgcacccaatgccagt
gagaagacagttgtagacaaacttttccaaagggatgcacttgttcgtcaaagtcagctg
gtggtggactggttggaaagtatagccaaggatgaagttggggacttctctgataacatt
gagtattatgcaaaatctgtatattgggaaaatactttacacacattaaagcagagaagc
atgtcatctttagggagtggtcgtccactggtgtctgaattggaccctgatgcccctatc
cgacagaagctgcctctagatgatcttgatcgtgaggatgacataagactgctgaagtac
ctcttcacacttatcagagctggcatgacagatgaggctcagcgtttgtgtaagcgatgt
gggcaggcctggagagcagctacattggaaggatggaagttgtaccatgatgctaatatt
aatggaggaactgaactgcaagctgtggagggaaatccatatagatgtgtgtggaaaacc
tgctgttggcgcatggcagaagatgaacagttcagtaaatatgaaagagccatctatgca
acactgagtggaaatctgaaacagcttcttcctgtgtgtgagtcctgggaagacactgtt
tgggcacattttaaggttatggtggacagtctggtagagcaagagatcagagcatctgtc
atctcaattaatgaggcaaatgagcttcccagagagtatttggaggcaaactggacttta
gagagagtttttgaggagcttcaagccacagacaaaaggagggtattggaggaaaaccgt
gaacactaccatataattcagaagttcgttatccttgcagatgtagatggtcttatggat
gaattctctgagtggttggcaaatgaaaaaaaattactgctgggacatcttctgagattc
atgacacatctgattttattcttccgaactctgggactacagactaaggaggaggtctct
gtggaggtgttgaagacttacatacagaggctcattaatgagaagcagattgagctgatt
gctttttatgttagccacctacctcaggatcttgcaatttcacaatatgctgtgtttctg
gagaatgtcactgatccggagcagcggcagcggtgtctagagcttgccaaggaagcaggt
cttgatgttgcatctataacaaagacagttgttgaaaacacacgcaaaaaagatgcaggg
gaatttgctcaccacaaccttgcaccggctttagattcggggaccagtgaggaggaccga
gcaaagatcaatgtgattgattggctggtttttgatcctgctcagagggcggaagctttg
aagcagagtaatgccatcatgaggaaattcttagcctccaaaaagcatgaagctgctaaa
gaagtatttgccaagattccccaggattccatagctgaaatttacactcagtgggaggag
caagcaatggacagtgctctgccagctgaggatgataatgccatccgggaacatttgtgc
atcagagcctatttggaagctcatgaagcatttaatgagtggtttaagcacattaattct
cctcctcaaaaaccaactttggttggacaagcatcattcactgagaaagtggcctatgag
cataaagagaaaaagtatgagatggattttggtatctggaaaggtcacttagatgctcta
acaacagaagtaaaagagaagatctacaatgttctgctttttgttgacggaggctggatg
gttgacgtcagagaggatacagaagaggaccctgagcggagccatcagatgaacttgtta
aggacactgtgcttgccaatgatgtgctttctcttgcacactgtgctacacaatacaaag
cagtacaaagactgccttagactggcagacattatttcatctgaacatcagaagctttac
atggtattttcaaagacagaaatgagaaatctactacagaaattaagagagtcatctttg
atgttgttggaccaacagctggatcctttgggatatgaaatccagccctga
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