Xenopus tropicalis (tropical clawed frog): 100493178
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Entry
100493178 CDS
T01011
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04310
Wnt signaling pathway
xtr04520
Adherens junction
xtr04916
Melanogenesis
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100493178 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100493178 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
100493178 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100493178 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100493178 (lef1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
100493178 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100493178
NCBI-ProteinID:
NP_001230763
Xenbase:
XB-GENE-485517
UniProt:
A0A8J0QGW0
LinkDB
All DBs
Position
1:complement(66958001..67040972)
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AA seq
372 aa
AA seq
DB search
MPQLSGAGGGNGGGGDPELCATDEMIPFKDEGDPQKEKIYAEISNPEEEGDLADIKSSLV
NETEIIPSSNSHEISRRRQDSYHEKSREHPEDAGKHPDGGLYSKGPSYTGYPSYIMMPNM
NNEPYMSNGSLSPPIPRTSNKVPVVQPSHAIHPLTPLITYSDEHFAPGAHPSHIPSDVNS
KQGMHRHPQAPDLPTFYPLSPGSVGQMTPPLGWYPHHMVSGPPGPHATGIPHPAIVNPQV
KQEHPHNDNDLMHMKPHHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESTS
GAGPPRMTAAYI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctctctggagcaggggggggcaatgggggtgggggagatcctgagctgtgt
gccacagatgagatgatcccctttaaagatgaaggggatccccaaaaggagaagatctac
gctgagatcagcaacccggaggaggagggagacctcgcagatatcaagtcatctctggtc
aatgagactgagattatccccagtagcaacagtcacgagatttccagaagaagacaagac
tcttatcatgaaaaatctagagaacatccagaagatgcaggaaaacatccggatggcggc
ttatacagcaaaggcccttcttatactggatacccaagctatatcatgatgccaaatatg
aataatgagccttacatgtcaaatggatctttgtctcctcccattccaagaacatcaaac
aaagtcccagtggtgcagccatcacatgccatccatcctctaacaccactcattacttat
agtgacgagcactttgcaccgggagcacacccttcacatatcccatcagatgtcaactca
aagcaaggcatgcacaggcatcctcaagccccagacctccctacattttaccctctgtcg
cctggaagtgtgggccagatgacaccaccattgggctggtatccgcaccatatggtttct
ggtcctccgggccctcacgcaactggaattcctcacccagctattgtcaatcctcaggtt
aaacaagaacatccacacaatgacaatgacctaatgcacatgaaacctcaccacgaacag
agaaaagagcaggaacccaaaagacctcacataaagaagcctctgaatgctttcatgttg
tatatgaaagaaatgagagcgaatgtagtagcagaatgtactctcaaagaaagtgctgcc
atcaaccagattctgggtagaaggtggcatgcattgtctcgggaagaacaggccaaatat
tatgagttagctcgcaaagaaaggcaactacacatgcagctttacccaggatggtctgca
agggacaactatggtaaaaaaaagaagaggaagcgggagaagctgcaggaatccacatca
ggtgcaggcccaccaagaatgacagctgcctacatctga
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