Xenopus tropicalis (tropical clawed frog): 100493200
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Entry
100493200 CDS
T01011
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100493200 (fem1c)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100493200 (fem1c)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
CbiG_N
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
100493200
NCBI-ProteinID:
XP_002931764
Xenbase:
XB-GENE-998529
UniProt:
A0A6I8S5Y3
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Position
1:172005058..172024560
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AA seq
617 aa
AA seq
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MDLKTAVFNAARDGKLRLLSKLLENKAKDEVVVLMSEKTNGATPLLMAARYGHLDMVDYL
LDQCSASVEIGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLDHGASVNNTTLTNSTPL
RAACFDGHLEIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQFLLEKGADVNRKSV
KGNTALHDCAESGSLEIMQMLLKYGARMEKDGYGMTPLLSASVTGHTNIVDFLTQHPQTS
KIERINALELLGATFVDKKRDLLGALKYWKRAMDMRYSDRTNIISKPEPQTLIMAYDYAR
EVNTAEELDNLIADPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFKRCINL
WKYALDMQQNNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTTVTFDDLMGILCKSVM
EIDRAVKQTAPPPDQVQLNKALSIILHLICLLEKVPCSPDQEHFKKQNIYRFLKLHPKGK
NNFSPLHLAVDKNTTCVGRYPVCKFPSFQVTAILLECGADVNVRDAEQNSPLHIAALNNH
PDIMNLLVKSGAHFDSTNSHNQTACDLLDEKEMAKNLIQPINHTTLQCLAARVIVKHNIQ
YKQEIPEKLESFVLLHR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaagacagcagtgttcaatgcagctcgtgatggtaaacttcgtcttctttcc
aagctgctggaaaacaaagcaaaggatgaagttgtcgtgctaatgtcggagaaaacaaac
ggtgccacccctcttttaatggcggccaggtatggtcacctggatatggttgattactta
ctggatcaatgtagtgcctctgttgagattgggggctctgttaattttgatggtgagaca
atagaaggcgctccacctctctgggctgcctctgctgctgggcacctaaaagtagtccag
tcactactggatcatggagcttctgtgaacaatacgactcttaccaactccacacctttg
cgggcagcctgcttcgatgggcatctagagattgtcaagtacctggtagagcacaaagct
gatttggaagtagccaaccgccatggacacacctgtttaatgatttcttgctacaagggt
cacaaagagattgcacagttcctcctggagaagggagctgatgtaaacaggaagagtgtt
aaaggtaacacggccttacatgactgtgctgaatctggaagtctggaaatcatgcagatg
cttctaaagtatggagccagaatggagaaggatgggtacggcatgacaccgctactgtct
gccagcgtcactgggcacacaaacattgttgactttcttactcagcacccacaaactagc
aaaattgagcgcataaatgcacttgaactactgggagcaacatttgtagataagaagaga
gacctcttgggtgccttaaagtactggaagagagctatggatatgcgatacagtgatagg
actaacattatcagcaagcctgaaccccaaactttaattatggcgtatgattatgcaagg
gaggtaaataccgctgaagagttagacaacctcattgctgatccagatgagatgagaatg
caagcccttctgattagggaacgaattttgggtccttctcacccagatacatcttactac
atcaggtaccgtggggcagtctacgccgactctggaaactttaaaagatgcatcaatttg
tggaagtatgccttggacatgcagcaaaacaacttggaccctttaagtccaatgactgca
agcagtttgttgtccttcgcggagcttttttccttcatgcttcaggaccgggcaaaaggc
ctgttaggaactacagttacatttgatgatctcatgggcatactgtgcaaaagtgtcatg
gaaattgacagagccgtcaaacaaacggcaccacctcctgaccaagtccagctaaacaag
gccctctctattatcttgcacttgatctgtttgctggaaaaggtaccatgcagccctgac
caagagcacttcaaaaagcaaaatatttataggttccttaagctgcatcccaaaggaaag
aacaacttcagccccctccacctggcagtagacaaaaacacaacttgtgttggccgttat
cctgtttgcaaattcccctcatttcaagtgactgccatcttgctggagtgtggcgcagac
gtaaatgtcagagatgccgagcagaacagccctttgcacattgctgctcttaacaaccac
ccagatattatgaatctgctagtcaaatccggagcacacttcgactcgacaaattcgcac
aaccagactgcctgtgatttactggatgagaaagaaatggccaagaacttgatccagcct
atcaaccacactaccctacagtgtctcgctgcacgcgtgatagtgaaacataacatacag
tacaaacaagaaatcccagaaaagctggagagctttgtattgcttcatagatga
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