Xenopus tropicalis (tropical clawed frog): 100495443
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Entry
100495443 CDS
T01011
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100495443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100495443
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100495443
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100495443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRY
zf-RING_5
zf-RING_4
zf-RING_6
U-box
BshC
Prok-RING_4
Fib_alpha
Macoilin
RST
Exonuc_VII_L
DUF5082
DUF3584
Motif
Other DBs
NCBI-GeneID:
100495443
NCBI-ProteinID:
XP_002943039
UniProt:
F7CTL7
LinkDB
All DBs
Position
9:complement(1997907..2000201)
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AA seq
542 aa
AA seq
DB search
MCNMPRPSVLRLMSYFHFVFLLPAMAAADLREELNCSICLDLYTHPVMLPCGHNFCQGCI
KEVLNSQGGSGGYSCPECRAEYQKRPALQRNWTLGNIAERFHSAEPGVTGIPCTYCIGAT
TPAVRSCLHCETSLCDVHLKIHNKTLDHTLIEPTASPEKKKCRAHKELLIYYCHQDASSL
CASCCQTGLHKGHRVDPLNEALEKKKQTLRNLLQTLSAQRADTQNRIQVLQHHKGQAEAE
ANGEAERVTALFRGIREELEALEKRLLSDISRQKTQMLTQLTDLLQQLEIKKDEMSRKIR
HIEELCNMADPLPVLQEPDGVALCGAEGADNDDTRVPAVGHLDGDLISVTLSRGLSDIVA
GAKGRIYGQKPTDLSLDPNTAANNVFVSGDLKTATWSEVNLHHTPRAERFEHCQVLSVGH
YTSGRHYWEVEASKSGIWRVGVAYAGIDREGDQSCIGDDKKSWCLYMFDGEYSAIHNSQE
QQLHPPSPLQRIGIFLDYEAGRLSFYELSEPIRHLHSFSASFTEPLHAALRVYMNGWVSI
RT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacatgccccgcccctccgtgttgcgactcatgagctactttcactttgtgttc
ctgcttccagcaatggcggctgctgatctgagagaggagctgaactgctccatctgcctg
gacctttatacccaccccgtgatgctgccctgtgggcacaacttctgccaaggctgcatt
aaggaggtgctgaattcccagggggggtctgggggttattcctgcccagaatgccgagct
gagtaccagaagcgcccggctctgcagaggaactggactctggggaacatagcagagcga
ttccattcagcagaacccggggtgactgggattccctgcacctactgtatcggtgccacc
acccccgctgtcaggtcctgcctccactgcgagacctccctgtgtgacgtccacctgaag
atacacaacaagacattagaccacacgttgattgaacccaccgcctccccggagaagaag
aagtgccgggcacacaaggagctgctgatctattactgccaccaagatgcctccagcctg
tgtgcctcctgctgccagaccggcctgcacaagggccacagggtggacccactcaatgag
gccttggagaagaagaagcagacgttgaggaaccttctccagaccctgagcgctcaaaga
gccgacactcagaaccggatccaggtcctgcaacatcacaagggacaagcggaggctgaa
gccaatggggaggccgagagagtcactgccctgtttaggggcattagggaggagctggaa
gccctagagaagcgactcctgagtgacatctccaggcagaaaactcagatgttaacccaa
ctcactgacctactccagcagctggagataaagaaggacgagatgtccaggaagatccgg
cacattgaggagctgtgcaacatggcagatccactccccgtcctacaggaaccagatgga
gttgccctttgtggggctgagggggcagataatgatgatacaagggtccctgctgtggga
catctggatggggatctgatctcagtgacattaagtagaggattaagtgatattgtggcc
ggggcaaagggaaggatctacgggcagaagccaacggacctatcactggatccaaacaca
gcggccaataatgtttttgtatcaggggatctgaaaactgccacctggtctgaggtgaac
ttgcaccacacgccccgggccgagagattcgagcactgccaggtcctgagcgtggggcat
tacaccagcgggcgccattactgggaagtggaggccagtaagtccgggatatggagggtg
ggcgtggcctatgccgggatagacagggaaggggaccagtcgtgcattggggacgacaag
aagtcctggtgtctctacatgttcgacggggaatattcggcgatacacaattcccaggaa
cagcagctccaccccccgtcccccctgcagagaattgggatattcctggactacgaggcc
ggacgcctgtccttctatgagctgagtgagccaatcaggcaccttcactccttctccgcc
tctttcactgagcctctccatgccgccctgcgggtctatatgaacggctgggtcagtatc
aggacctag
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