Xenopus tropicalis (tropical clawed frog): 100497766
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Entry
100497766 CDS
T01011
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100497766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100497766
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100497766
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100497766
NCBI-ProteinID:
XP_031757157
UniProt:
F6U3S3
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Position
4:152596208..152716149
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AA seq
618 aa
AA seq
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MTAEKTLPVINGKPEDALDSEAPGSTLGHSNDKKVNERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFIFCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFSAELPWATCGHKWNTDKCVEFQKLNMSNAS
QISFVNATSPVMEFWERRVLAISDGIEHIGELRWELALCLLGAWTVCYFCIWKGTKSTGK
VVYVTATFPYVMLLILLIRGVTLPGASQGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPRAVTMMPLAPLWAALFFMMLIFLGLDSQFVCVESLVTAVVDMYPKIFRR
GYRRELLILALSIVSYLLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAVFECVCIGWVYG
SNRFYDNIEDMIGHRPFVLIKWCWMFFTPGICASIFIFFLVKYKPLKYNNVYTYPAWGYG
IGWMMALSSMVCIPLWIIIKMCQTEGSFIQKLKTLTLPSPELKMRGKLAAGAATANDCEA
KLKGDGNISAITEKETHF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgaaaagactctcccagtcatcaatgggaaacctgaagatgctttggactcc
gaggctccgggttctactctggggcacagtaacgacaagaaagtgaatgagaggggccac
tggaacaacaaggtggaatttgtgctgtcggtggccggggagatcattgggctcgggaac
gtgtggcgcttcccctatctctgctacaagaatggaggaggagccttcctcatcccgtat
gtggtcttcttcatcttctgcggcattcctgtcttcttcctagagaccgccctggggcag
ttcacgagcgaagggggcattacctgttggaggaaggtctgcccactctttgaaggtatt
ggctacgctacccaggtgatcgaggcccatttaaatgtctattacatcattatattggcg
tgggcaatcttctacctgttcaactgcttctctgcggagctgccctgggcaacctgcggg
cacaaatggaacacagacaaatgtgtggaatttcaaaagctcaacatgagcaacgcgagt
cagatatcatttgtcaacgccacctctccggtcatggaattctgggaacgcagagttcta
gccatatccgatggaattgagcacattggggagctgcgctgggaattagccctctgcctt
ctgggcgcctggaccgtttgttatttctgcatttggaaagggaccaaatccacaggaaag
gttgtgtatgtcacggccacgttcccctacgtgatgctcctcatcctcctcattcgtggg
gtgactctccccggagcctctcagggcatcaagttctacctgtaccccgacctgtcccgg
ctgtcagacccacaggtttgggtcgatgccggaacacagatcttcttctcctacgccatc
tgcttggggtgcctgacggcactgggcagctacaataattacaacaataactgctacagg
gactgcctcatgctttgctgcttaaacagcggaaccagttttgtcgcgggtttcgctata
ttttccgtccttggattcatggcttacgaacaaggggtgcccattgccgaggtggcagag
tcaggtcccggattggctttcatcgcctacccaagggctgtcaccatgatgcccctcgct
cccctctgggcggcgctgttctttatgatgctcatcttcctcgggctggatagtcagttc
gtctgtgtggaaagcttggtcaccgccgtggtggatatgtacccaaagatattccgaaga
ggctacaggagggaactgctgattctggcgctttctatcgtgtcgtatctccttggactt
ataatgttaactgagggcgggatgtacgtgttccagctcttcgactcgtatgcagcgagc
ggcatgtgtctgttatttgtagccgtgtttgagtgcgtctgtatcggctgggtgtacgga
agcaataggttctatgataatatagaagatatgattggacatcgcccgtttgtattaata
aagtggtgctggatgttcttcaccccagggatctgcgcaagcatcttcatattcttcttg
gtgaagtacaagccgctgaagtacaataacgtatatacttaccccgcgtgggggtacggc
atcggctggatgatggctctctcctccatggtgtgtatccccctgtggatcattatcaag
atgtgccagactgaaggcagctttatacagaaactgaagaccttgacgttaccaagccca
gagctgaagatgagggggaaactggcggccggcgccgctacagccaacgactgcgaagcc
aaactgaaaggcgacggcaacatctccgccatcacagagaaagagacgcacttctaa
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