Xenopus tropicalis (tropical clawed frog): 100498531
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Entry
100498531 CDS
T01011
Symbol
arhgef18
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100498531 (arhgef18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100498531 (arhgef18)
Membrane trafficking [BR:
xtr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100498531 (arhgef18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
100498531
NCBI-ProteinID:
XP_031760977
UniProt:
F6ZCH8
LinkDB
All DBs
Position
1:103118506..103232568
Genome browser
AA seq
1532 aa
AA seq
DB search
MVQIDPGSHRHTAGLNVLVKVQSPPVQEMSDSILNNSWPSFSKLWLKRWSFKRASECKPC
STFSAIPDSRSVTPDADPNSEEAFLLAEEKDDLSVDLNDYSNDIISSSEDLTSIDSSLQG
TEYYKDLVQMDAAEDPRSEQEEHKLASASFCMADETDITLGKGEVIITYTKPFICPVSCG
PGAAIEENITENTTEGDKGSYRQLLPIKFEEPIPVLVRSLSTSRRHSWDDAVSPSDTVRR
LSLSNSEIANDGERDIEESAAATMVHSMELPGPWVTNLSIQADVGELGVQETNAESKEVD
SHGKRLRSKSVPSTLDKISTTRISRSLESSCPVIEVIQTPHLETTEKDHVEPTHVLFVQQ
VLQELKQYHGTKNKQEGSREPKQNLTWFEFLSNEPEETTKSEKVEKGTKVKRRLSSLRSR
VTGSWQKDKGKIKEELKDKGKEAKDTWINTNGHELVPGCFSSHAKCTLCTKALANRHGLQ
CMYCAVNVHKNCKALLPECTSNKLKKDNSPKPVASSLSCQQASLKENPRIAIVGLDGTHA
QARGLGMTVTHRGGSRVEIQSNSGSRASTSTAEMDDVDSGLSRLKLFSDENVSLAPDSVF
LEDSYTNVKSELDLDALEFEAGSWSCAVDPLYLKKQKKEVIKRQDVIYELMQTEMHHVRT
LKIMLRVYSRALSEELQYGNKDIHQIFPCVDDLLELHVNFLARFKERRKESMEEGSDRNY
MIQKVGDILVQQFSGESGERMREKYGIFCSQHNKAVSRYKDLLRDSKKFQNLMKKIGNSS
IVRRLGVQECILLVTQRITKYPVLVERIIQNTEEGTEDYETLTQAIALIKDTITDVDSRV
HESEKVQRLREIVSKMELKSSGKLKNGTFRKQDILRRQLLHDGVLYWKTASGRLKDILAV
LLTDILLLLQEKDQKYSLSPVDNKAPVISLQKLIVREVANEEKAMFLISASNTGAEMYEI
HTNSKEERNFWMNIIRGAVESCPVQDAEILNEAEEEKKLFTERAAKIKEFQERLNQKDYV
IVQSLNEKLQTCMEMAELYGYEDLPQEPRITLLPRAETGENLEGKGILHSAVTAAERIHY
MLLSQTALLNPLDEANNSATILPRRSETFGGYDTDSFKQKVKDRRAVSMGSDSQVQDGTL
IEPVVSTTDNNSPPVCHETEMITCVETLLQHLYSLQAVISQQDSYVEVQKEREKQFRQQS
SRGNMLLEQEKQRNFEKQREELGNVQKMQDQLRLEKQKWERERERQQREAEAMENMLRQR
MGDSELQLQKLHQERDELEAQRKEYQHDLERLRESQKAVEKDRERLELMKRIKATSAGAG
SFSSDLIPVVVHSAASNGEGMLSTEAPSHLPLKPLAKTTMSMSAADYLERPEVARRESNV
TDIRPALKKEVPIHLLSATNQIQKQAALTRQQIPTHLAMDKGKEKPSRGKASHRTESTAS
LDHRLGFPPKLSGKEDGTVRSRRSASPSPFSSQTVFFQQDPVGQAEPSLDTPFYTPVLYR
PSSFHLLPPSFPPQPPPPPAEDEGSKENVIYF
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggtacagatcgatcctggcagccacagacacactgctggattaaatgtccttgtgaaa
gtccagtcaccacctgtccaagagatgtctgactctattctaaacaactcctggccgtcc
ttctctaaactttggttgaagaggtggtcattcaaaagagcatcagaatgtaaaccatgc
tcaacattttctgccattccggactctcgtagtgtaacaccagatgcagatccaaattct
gaagaagcatttctcctggcagaagaaaaggatgatctgtctgttgatctgaatgactat
tccaatgatatcataagcagcagtgaggatctgacttccatagattcttctcttcaaggc
acagaatattacaaagatcttgtgcaaatggatgcagcagaagaccctagaagtgaacag
gaagagcacaaacttgcttctgcttccttctgcatggctgatgaaacagatattaccctt
ggcaagggtgaggtcatcataacttacaccaagccatttatttgccctgtgtcctgtggg
cctggagcagccattgaagagaacataacagaaaacacaacagaaggggacaaaggatcc
tacagacaacttttacctattaaatttgaggaacctatccccgtcttggtgagatcactc
tctacttcaagaagacacagctgggatgatgcagtgtcaccatcggatactgttcgcagg
ttgagtctcagtaattcggagatagccaatgatggagagagggacattgaagaatcagct
gctgcaaccatggtgcacagcatggaattacctggaccatgggtgacaaacttgagcata
caggcagatgttggggaacttggagtacaggaaaccaatgcagaaagcaaggaagtagat
agccatggcaaaagactgcggtcaaaatctgtgccttctacactggataagatttcaacc
accagaatttctcgcagcttagagtcttcctgccctgttatagaagtgatacaaacccct
catctggaaaccactgagaaggaccatgtggaacccactcatgtgttatttgtacagcag
gtgcttcaggagctcaaacaatatcatgggactaaaaataagcaggaagggagcagagaa
cccaagcagaatttgacctggttcgagttcctctctaacgagccagaggaaacaacaaaa
tctgagaaagtggagaaaggtaccaaggtgaagcgaaggcttagctcactgaggagcaga
gtcactggatcctggcaaaaagataagggtaagataaaagaagagctaaaagacaaaggc
aaagaggcaaaggacacctggattaacaccaatgggcatgagttggtgccaggctgcttt
tccagtcacgccaaatgcactttatgcaccaaagcacttgcaaacaggcacggactacag
tgcatgtattgtgcggtaaatgttcataaaaactgcaaggccttgctccctgaatgcacc
agcaacaagctgaagaaagataactcaccaaagcctgtagcatcttctctgagctgccag
caagcttctttgaaggagaatcctcggattgccatagtagggctggatggaactcatgct
caggctcgggggctcggaatgactgtcacccacagaggaggttcacgagtagaaatacaa
tcaaattcaggaagcagagctagtaccagcacagcagagatggatgacgtagattctggt
ttgtcaaggctaaagctcttctctgatgaaaatgtttccctggctcccgattcagtattt
ttagaggactcctatacaaatgtcaaaagcgagttagatcttgatgcattggagtttgag
gcaggatcgtggagttgtgctgttgatccactttatctcaaaaagcagaagaaagaggtg
ataaaaagacaggatgtcatttatgagttaatgcagactgagatgcaccatgttagaact
ctgaaaatcatgctaagggtgtactcgcgagctctctcagaggagctgcagtatgggaac
aaggatatacaccagatctttccatgtgtggatgatcttctggagctacatgttaacttc
ttagcaagattcaaagagaggcgcaaagaatctatggaggagggaagtgatcggaattat
atgattcagaaagttggtgatattcttgtgcagcagttctcaggtgaaagtggagagaga
atgagggagaagtatgggatcttttgcagtcagcacaacaaggcagtgagtcgttataag
gaccttttgcgggacagtaagaaatttcaaaaccttatgaagaaaattggcaattcttct
atagtaagacggctgggtgtccaggagtgcatacttttggtgacacaaaggattacaaag
tatccagtacttgtagaacgtatcatccagaatacagaagaagggacagaggattatgaa
acgctaacacaggcaattgcacttattaaagacactattactgatgttgattcccgtgtc
catgaaagtgagaaagttcagcgcttgcgggaaattgtaagcaaaatggagctgaagtct
tcagggaagctgaaaaatgggacatttagaaagcaggatattctccgaaggcaattgctc
catgatggggtgctgtactggaaaactgcctctgggcgtttaaaagatatccttgctgtt
ttgcttactgatattttgcttctgctgcaagagaaagaccagaaatactcattgtctcct
gtggacaacaaagcacctgtgatttcccttcaaaaactgattgtccgggaggtggctaat
gaggaaaaagccatgttcctgatcagtgcttcaaacaccggtgcagagatgtatgaaata
cacactaactccaaagaagaaaggaatttctggatgaatataattcgtggtgctgtagag
agttgccccgtacaagatgcagaaatcctcaacgaggcagaagaagaaaagaaactcttt
actgaaagagctgctaaaataaaagagtttcaagagcgcctaaatcagaaagactatgtt
attgttcagtccctaaatgagaagttgcaaacatgtatggagatggcagaattatatggc
tatgaagaccttcctcaggaaccgaggatcaccttgcttcccagagctgaaactggggag
aaccttgaaggaaaaggcatcctacactcagcagtcacagcagctgaacgcatccactac
atgcttctgtcacaaacggcattgctgaatccactggatgaggcaaacaattctgccaca
atcttacccagaagatctgagacttttgggggctatgacacagatagctttaaacaaaag
gttaaggaccgaagggccgtgtctatgggctcagacagccaagtgcaagatggtaccctt
attgagcctgtagtatccactacagataataacagcccaccagtatgtcacgagactgag
atgattacttgtgtggagacattacttcagcatctttacagtttgcaggcggtgatttca
caacaagatagttatgttgaggttcaaaaagaacgggagaaacagttccgacagcagtct
tcccgcggcaacatgttattggagcaggaaaagcagcgtaactttgagaagcagcgggaa
gagctgggcaatgtgcagaagatgcaggatcaactgaggttggagaaacagaagtgggaa
cgtgaacgggagaggcaacagagggaagcagaggctatggagaacatgttgaggcaacga
atgggtgacagcgaactccaattgcaaaagctgcatcaggagcgtgatgaactggaagca
cagagaaaggaatatcagcatgacttagaaagacttagagaatcccagaaagctgtggaa
aaagacagagaacgcctggagctgatgaagaggattaaagcaaccagtgctggagctggg
tcattttcatctgacttaataccggtcgtagtccattctgcagcttctaatggggaagga
atgctcagtacagaggcacctagccatttacccttaaaaccccttgccaaaacaaccatg
tccatgtcagctgctgactacctagagaggccagaagtggctcgaagggaaagtaatgta
actgacatccgtccagcacttaaaaaggaagtgcctattcatttattaagtgcaaccaac
cagatccagaagcaggcagctttgaccagacagcagatccccacccatcttgcaatggac
aaaggcaaggaaaagcctagcaggggaaaggcttcacatcgaacagagagcacagcatca
ctggaccacagactggggtttccacccaagctctctggaaaggaagatggcactgtaaga
agcagaaggtctgcaagtccaagtccatttagcagccaaactgtattctttcagcaagat
cctgttggacaagctgaaccttctcttgatacaccattctatacacccgtcttgtatcga
ccaagcagcttccacctcctgccaccatcctttcctcctcagcccccaccacctccagct
gaggatgagggaagcaaggaaaatgttatttatttctaa
DBGET
integrated database retrieval system
